EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18307

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:139729550-139730130

Target genes

Number: 9
Name	Ensembl ID

Pdgfa	ENSMUSG00000025856
Prkar1b	ENSMUSG00000025855
Heatr2	ENSMUSG00000025857
Gm15672	ENSMUSG00000086873
Sun1	ENSMUSG00000036817
Get4	ENSMUSG00000025858
Cox19	ENSMUSG00000045438
Gpr146	ENSMUSG00000044197
3110082I17Rik	ENSMUSG00000053553

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid3b	MA0601.1	chr5:139730006-139730017	ATATTAATTAT	+	6.02
FOXK1	MA0852.2	chr5:139729563-139729577	TACTTGTTTACATC	-	6.32
SPIC	MA0687.1	chr5:139729777-139729791	GACTTCCTGTTTTC	-	6.11

Enhancer Sequence

GGCTCGTGAG TGATACTTGT TTACATCTGA GGACAATTCC CACTTCCCAC ATGCCCAGAT 60
TGAGCCTGGC AAGTAGCCAG GTGGACATGG GAGGGAGGGG CATGGTTAAG GCCACACGCA 120
GTAGTTAGCA AGCCATCAGG GACCAGCCTT GCAGTATTTC CCTCCGTAAG TGCTCAGTCC 180
AGGGGGTTGG CAGGTGTGGG ATGAGCCTTG GCGTCCTTGG TGTCAAAGAC TTCCTGTTTT 240
CTTTACCTAT TGGGCGCCCT GGATTTGGAG CAGCGGGGTT TAGTCAGCTT ATCGAAACAT 300
TAGCCCTTGC TCTAATCACA GGTTACCTGA AGGGCAGCCT TGTTGGGGAA TTTTTCTGTA 360
AACTAGACAC TATAAATACA AACCAGTCTG GCGACATCTA GTTTCATCAC AGTGTCCCTA 420
GTGCCTTTAA AAACAAAAAC TAAAACACTC TTAATTATAT TAATTATATT GGGAAGGCAC 480
TTGCTGTATT CTTTAGATAA AAATCTGTAG CCACGTGTGG TGGCACACAC CTTTAATCCC 540
AACACTCAAG AGGCAAAGGC AAGCCGATCT CTTGTGAGTT 580