EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18006

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:124626150-124627370

Target genes

Number: 22
Name	Ensembl ID

Zcchc8	ENSMUSG00000029427
Rsrc2	ENSMUSG00000029422
Denr	ENSMUSG00000023106
Ccdc62	ENSMUSG00000061882
Vps37b	ENSMUSG00000066278
Abcb9	ENSMUSG00000029408
Gm16001	ENSMUSG00000085433
Ogfod2	ENSMUSG00000023707
Arl6ip4	ENSMUSG00000029404
Gm16338	ENSMUSG00000089842
Pitpnm2	ENSMUSG00000029406
Mphosph9	ENSMUSG00000038126
2810006K23Rik	ENSMUSG00000047635
Cdk2ap1	ENSMUSG00000029394
Sbno1	ENSMUSG00000038095
Setd8	ENSMUSG00000049327
Rilpl2	ENSMUSG00000029401
Rilpl1	ENSMUSG00000029392
Tmed2	ENSMUSG00000029390
Eif2b1	ENSMUSG00000029388
Gtf2h3	ENSMUSG00000029387
Atp6v0a2	ENSMUSG00000038023

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr5:124627310-124627328	GCAAAGTGGGCGTGGCAG	-	6.4
KLF14	MA0740.1	chr5:124627313-124627327	AAGTGGGCGTGGCA	-	7.73
Klf12	MA0742.1	chr5:124627312-124627327	AAAGTGGGCGTGGCA	-	6.06
SP3	MA0746.2	chr5:124627314-124627327	AGTGGGCGTGGCA	-	6.71
SP4	MA0685.1	chr5:124627312-124627329	AAAGTGGGCGTGGCAGG	-	6.11
SP8	MA0747.1	chr5:124627314-124627326	AGTGGGCGTGGC	-	7.22

Enhancer Sequence

GATGGAGGTA TTGAATGGCA CACCCTCTCC TGGTGTCTCT AACTCTGTTT TTGGAGGCAA 60
GTTAACTTAG CTGGTGATGG GACAGGAAGC TGCTAAAAGT ACACAGATCT GTTGTTTCCT 120
AGGACCAGCT GCTACCAGGC CTTTGTTTCT CAGTCAGTGT AGTAGGAGGC TTATCCTTTG 180
GGGACATCTA CCTGCTGGGT ATAATAGGAG TAAGGTTTCC CTAGCGCCCC AAGCTCAAAC 240
CTACATGGGA TGTCAGAATG GGAAATAACG AATCAAGGCG AATTTGTGAT AAGATCTTAC 300
TAGATTTAGA GTGGGCTCAA AATGTAACTA GCAACTGGTA TCTTTGGAGG AAGGGAGAGA 360
AGACAGAGTC ACAGAAGTGG AGGCCATGTG ATGATGGGAC CAGAGCAGAG TGATGCAGCC 420
ACAAGCTGAG GAAGTCCTAG AGCCACCACA AGTGGGACGA AGCTGTGAGG CTGTGCATCA 480
TCAGAGCTGG CACTGTCCGT GTGGTCGCAC AGATCCCCAG CCCCAGACTC TGGCCCGAGC 540
AGTGGTGACG AGCAGTTCTG CGGTTAAGTC ACCAGCCTCA GCACTGTGTC CGGGCACTCA 600
GTCCCAGCGT CCACCCTGGG CTTCTCCGTG TCTACCAGCC AGTCTTCTCT GCTCTGCGTG 660
CACTGTGGGA AATGACTGCA GCCACTCTAG CTGTGAGAGT AGCCTCTCTG TGAGAGTAGG 720
CTCTTAGGCA GCCGGTTGTT GGGCTGTTAC CAGGGCTGGG CTCCAATTAC CTTGGGGCAC 780
TTAAGGAGCC TTCTAATGCT AATGAGAAGT CTGTGTGTGG TCAGGTTGTT AAGACACTTG 840
AGGGGAACTG GCCATTCAGC CCATCTAGTT CTGATTGCTG TTCAGCCTCT CTGCCCACCC 900
CCCCAATCCT GGGCTTTTGT AGGCCCCTGT GTTGGTCAGG CCAGGCTCGA CCTTGCCAAA 960
AATCCTGATG TGCGCCAGCC CTATGCACAT AGCTTTCAGA CCATGCTCAA GGAGAAAAGC 1020
GAGGTTCACA GGCACCCGGG ACACAGACTG CACACCCTAC ACTTTAGTTC TCAACCTGCC 1080
TCCAGTTAAA ATGCGGACCA TCTCAGAATC AGGGCTTTTG GAAGCTTTAG GACTACTAGC 1140
AAGGATTTCT CTGACAGCTG GCAAAGTGGG CGTGGCAGGA TGCTGAAGCA AGACAGTCCC 1200
TCTACCTCTC ACATCTCAAT 1220