EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18005

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:124609000-124610280

Target genes

Number: 22
Name	Ensembl ID

Zcchc8	ENSMUSG00000029427
Rsrc2	ENSMUSG00000029422
Denr	ENSMUSG00000023106
Ccdc62	ENSMUSG00000061882
Hip1r	ENSMUSG00000000915
Vps37b	ENSMUSG00000066278
Abcb9	ENSMUSG00000029408
Gm16001	ENSMUSG00000085433
Arl6ip4	ENSMUSG00000029404
Gm16338	ENSMUSG00000089842
Pitpnm2	ENSMUSG00000029406
Mphosph9	ENSMUSG00000038126
2810006K23Rik	ENSMUSG00000047635
Cdk2ap1	ENSMUSG00000029394
Sbno1	ENSMUSG00000038095
Setd8	ENSMUSG00000049327
Rilpl2	ENSMUSG00000029401
Rilpl1	ENSMUSG00000029392
Tmed2	ENSMUSG00000029390
Eif2b1	ENSMUSG00000029388
Gtf2h3	ENSMUSG00000029387
Atp6v0a2	ENSMUSG00000038023

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arntl	MA0603.1	chr5:124609218-124609228	GGTCACGTGC	+	6.02
Rarb(var.2)	MA0858.1	chr5:124609206-124609223	AGGTCAGAGTGGGGTCA	+	6.19

Enhancer Sequence

TCTCCAGAGG CCAGTCAGTG GGAGCTAGAC CAGTACCTGC ATATCCCCGC ATGTCACACC 60
TCAGCCATTC GGACAAGACA GTCACATTCT CTGGAGCCCC GAACAGGACC TGGCTTTTAC 120
TGACACCTTT GGGTTTCAGA CCCTGCTTTT AAGATCCTAG AAAGGAAACC ATCCTCAAAT 180
TCCTCAGTGT CCCTGATGGT TCAACAAGGT CAGAGTGGGG TCACGTGCTG TGGTATCAGG 240
AAGGCCACGG CAGCACTGGG GTGGGACCTA AGACAGAATG GAGAGTATAA GCTGCTTCCA 300
GGTCATGGAC CAGGCAGAGT GGAGGTGTGC TGGGTGTCAC CCTGGGAATC AAGGCCCCAG 360
CCTCTCGAAA TAAAGCAGAA AACCTAAGCT AGGAGCCCAG AGGCCTTCTC CAAATGAAGG 420
AACTGCAGGG GAAGGGCAGA GCCCAGCTCC ACGGGAGAGC CTGCCAACTG AAGGCATCCA 480
TGGGAGCTTG GGGAGGATTA TGAGGGTTTG GCTCCAAGCA AAGGGAGCAA GCTGCAAGAG 540
GGCAAGTCCT CCAGACACCC TGAGCAAGAG GGAGGGCGGG AGAATTGAGT TTACAGCACT 600
TAATCTGTTT TTCCGGGATT AGCTGGGGTT TGACGTCACA GACGGGAGTC AGGAGTGAGG 660
CTGAGCAGAC ACGCAATTCA GTTGCATTCT GGTTATTAAG TCTGGAAGTT GTTTGATGTG 720
GGGTCATCGG GAGCCTGGAC TCTGGCAGCT TAGAGGGAGA CAGGGAACCA ACCACACTGG 780
GGTTGGGCTG GGGGAGGGGG TGGCTCTGTG ACTCGCTTGT GTGTAAATGT GCAGGAGCCT 840
GCTGCTCCCT TGCTCTCATG CTCTAGAAAA TCCTACGGCT CCTCTCTGTC TCCCAAACTC 900
TCTGGTCCCC AAACAGGAGT CAAAAAGCGG AACAGCAATC TGCTGCCTTT GTCACCTGTA 960
TCTAGTGATA AAGGGGTGAC ACAGGGGCAG AAGGGAAACA GCCCCTACAC GTGGACTGTC 1020
TTGGCTACAG CTGCTCTGGA GGTATGCGGT GTCTCAGGAG GAGAAAGTAT ATCACCTCAG 1080
AGTCAGAGCC CAAGTCTCAC TCTCGGTACC AAAGATTGTA CCCAGGGTCT CATACATGCC 1140
AGGCAGGCCT CCTACTACTG AGCTACACTC CAGACCCCGG AGGCTTCTCC TGAGGAATGT 1200
GTGCTGAGCT AGGAAACAAG TAGGGCCCTG GTCTGTAACG AAGAGGCTGA GGTTGTCCCA 1260
TGCTGGATTT CAGAGACCAA 1280