EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-17971

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:123157790-123158320

Target genes

Number: 18
Name	Ensembl ID

Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Gm15846	ENSMUSG00000079906
Atp2a2	ENSMUSG00000029467
Ift81	ENSMUSG00000029469
P2rx7	ENSMUSG00000029468
P2rx4	ENSMUSG00000029470
Camkk2	ENSMUSG00000029471
Anapc5	ENSMUSG00000029472
Rnf34	ENSMUSG00000029474
A930024E05Rik	ENSMUSG00000056735
Kdm2b	ENSMUSG00000029475
Morn3	ENSMUSG00000029477
Tmem120b	ENSMUSG00000054434
Psmd9	ENSMUSG00000029440

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1	MA0002.2	chr5:123158211-123158222	GTCTGTGGTTT	+	6.62
SOX10	MA0442.2	chr5:123158297-123158308	TCCTTTGTTTT	-	6.32
Sox3	MA0514.1	chr5:123158298-123158308	CCTTTGTTTT	+	6.02

Enhancer Sequence

CATTGGGTGA GCGGGCCTGG GGAGGGGCCG CGGCTGGGGG CAACCCAGAC TGTCGGGACC 60
TGGCAGCGCC CCCTTGCTCG CTCTCTGGGT CTGGGGCAAT AGCTGAGCCG GCCAAGCCCC 120
TCCTCCCCGA GTTCAAGGGG CGGCGACACG CCCTCGCCGG GCTCTAGCCA AGCCACCTGG 180
AACCAGCTTG AACAGGACAC TGGGGACTAC TGGACGTCCT GGGAGCTAAG CCTCGTCTTA 240
GCTAGACTGT CACCCCATCT TTCTCGCATC CTTCCCTCCC GACTTGCTTC ATGCTGCGCC 300
TTGGCTTGGT GGAGGGGCAG GGCAGGGAAG GCTTAACTCT GTGCGTCACG GACTTCTCTT 360
CGGTTCCTTT TCAAACTCGG ACAGAAACCA AGGCTTGTGG TTTTCATTCG GTACTTTCTG 420
GGTCTGTGGT TTCTGTTACC TTAAGAAGCT TCTGATAACC CAGTACCCTT GAGATGTCAC 480
ACTTCCCAAA AGTGTCCCAA GGTCACTTCC TTTGTTTTGT TGGATTGGTT 530