EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-17759

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:114408910-114409560

Target genes

Number: 10
Name	Ensembl ID

Cmklr1	ENSMUSG00000042190
Ficd	ENSMUSG00000053334
Sart3	ENSMUSG00000018974
Iscu	ENSMUSG00000025825
Tmem119	ENSMUSG00000054675
Selplg	ENSMUSG00000048163
Gm17122	ENSMUSG00000090458
Coro1c	ENSMUSG00000004530
Ssh1	ENSMUSG00000042121
Ung	ENSMUSG00000029591

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr5:114408919-114408937	GGGAGGCAGGAAGGAGAG	+	6.25
ZNF263	MA0528.1	chr5:114408921-114408942	GAGGCAGGAAGGAGAGAGGAA	+	6.12
ZNF263	MA0528.1	chr5:114408973-114408994	GGGGGAGGGAGCGCAAGAGGG	+	6.34
ZNF740	MA0753.2	chr5:114408964-114408977	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr5:114408965-114408978	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11760

chr5:114408534-114410889

Placenta

Enhancer Sequence

GGCAGACCTG GGAGGCAGGA AGGAGAGAGG AACTCAGGAT GGGACCTGTC CACAGGGGGG 60
GGGGGGGGAG GGAGCGCAAG AGGGCGCAAG GCGGCTTGGG TTCTGTAGCG GTGGAAAGGC 120
AATTCAGAAA TGGCTCCCTC TTGGAGGCTC TGCTAGCGAG GTGTGTGAGG GACACACAGT 180
AGCTAGAAAC AACTGTCAAC TCCCAGAGGC TGTATCAATT AAGCTCGCAG GCAGACAGGA 240
TATCCCTCAC CGTTTCCAAA GGAATAAACA GTCGCCAGCA GCAGACCCCA TCCCATAGCC 300
CCTAACTCTC CCAAGCTGGT TGGGTCACAT TCCAGCAACC AACTCTAAAG CCTTCAGGTC 360
TGTAGGCAGG GCTGTACTGC AGGCGTCTAA TGGCAGGAAA GGTCTTTAAG GAACAGCAGG 420
GGCTCCTGAG TGCACTGCTG ACCTGCGCCT CAGTGTGTAA CATCTTGGGG GAGGGGAGGA 480
GGGGGCTTTA CAATATGTAA GCTTTATTTA GTTAGCCACT TTTATTTCTT TTGACAAAAC 540
AACAACAACA ACAAAAAAAA CAACTCAAAG CTGAGAATTT CTCAGGGAAT GGGCTGCTGA 600
GGGATGCAAA GGCACAGGCA AAAGGGTCCC CCTGTCGTCG TGTCCCTCCC 650