EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-17046

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr5:31117270-31118430

Target genes

Number: 24
Name	Ensembl ID

4930471M23Rik	ENSMUSG00000029175
Cenpa	ENSMUSG00000029177
Dpysl5	ENSMUSG00000029168
Mapre3	ENSMUSG00000029166
Gm15461	ENSMUSG00000087258
Tmem214	ENSMUSG00000038828
Agbl5	ENSMUSG00000029165
Ost4	ENSMUSG00000038803
Emilin1	ENSMUSG00000029163
Khk	ENSMUSG00000029162
Cgref1	ENSMUSG00000029161
Abhd1	ENSMUSG00000006638
Preb	ENSMUSG00000045302
0610007C21Rik	ENSMUSG00000013622
Slc5a6	ENSMUSG00000006641
Cad	ENSMUSG00000013629
Mpv17	ENSMUSG00000090262
Gtf3c2	ENSMUSG00000029144
Snx17	ENSMUSG00000029146
Eif2b4	ENSMUSG00000029145
Ppm1g	ENSMUSG00000029147
Nrbp1	ENSMUSG00000029148
Krtcap3	ENSMUSG00000029149
Fndc4	ENSMUSG00000038552

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr5:31117961-31117981	AGGGAGTGTGTGTGTGGGGG	-	6.23
ZNF263	MA0528.1	chr5:31117459-31117480	TCCTCCCTCTCTCCCTCCCTG	-	6.09
ZNF263	MA0528.1	chr5:31117444-31117465	CCTCCTGCCCTGTCCTCCTCC	-	6.64
ZNF740	MA0753.2	chr5:31117976-31117989	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr5:31117974-31117987	GTGGGGGGGGGGG	-	6.92

Enhancer Sequence

TGTGAGTCCG GGCTGAGGCC ACGGTCGCCG TGGGGCTGAG TCAGCGGGAG GCCCGGGCCG 60
GGCTGGGGGA GGGCAACCGA GCTCCCCTTC CCTGCCGGCC CCCGTCCCCA CCCCCACCCG 120
TGTTCTGCGG GTCTCCGTCC TCGGTGGCCT CGGGGCCAGG CCTCCCCAAC CACTCCTCCT 180
GCCCTGTCCT CCTCCCTCTC TCCCTCCCTG TGGACCCACC TAGAGGTTCT TCCCCTCTAG 240
ATGTGGCGCT GTCGCACCTC TACCCATGGC CTTGTATTTT TCCCCAAACT CCCTCTGGCC 300
TGCCTGCCCT TGTCCCTTCT CTTTCCTCCG GGGCATGACA TCTCCCGGCT TCTAGTTTCC 360
CCGAGTGATA AGCCAGAGAA AGAGTGACAA GGTAAACAGC CAGGTGGAGG CTTGGGGGAG 420
GGGGACGTCG TATCTGTCCA AACCTTGGGA CCCCAGGATA CTTACCCACC TGCTCCTGAC 480
CTGCTGGAGC CAGAATTGGC TTAGGAAAGC AGGCCTGGAT AGTATAGTTC TAAGTAGCTG 540
CAGAGAGCAG GAACCACTTT AGGAACAGAT TTTGCTGAGA AGGGTCAAGC TATGCTGTGA 600
TCAGCTACTG TTGGCGCACC GAGCTGGTGT TTGTGTGGTG GCCTTCTTGT GTGCTGAGCC 660
ACTGCCCTGG CCACACTGTG CAGGGATGAG AAGGGAGTGT GTGTGTGGGG GGGGGGGGGA 720
GCTTAAGTTC ATGTGCTTAT GGTACATTTT TTTGTGAATA GCATCTTTCA GGACTCTTTA 780
AAGTTTTTTT TTTTCTTTTT TTCTTTTTTT TTTTTTTAAA GAGTCACTTT ACAACCTTGG 840
TATAAGCAAG TCCTTACTGA TTTTGGCAGG ACTTGATTTC CAATAACCTG TAAATTTGAT 900
GGAAAAACCA AATCGAGCAA ACAGTGGGCT TTGACAGTCT GACAGAGTGG AGAAAGAGCA 960
CGGTTGAGAG TCCCTCGTAC CTCTGAGGCC TATATCCCTA CCTCCTACAG CTGAGTGTCG 1020
GTGAGGGCTG CTGTCTGGTG GGGGCAATTC CCAGGGTTGT GTCTGCCACC TGCCAACTTG 1080
CCCAGCTTGC CATACCTAGT GTTGACATGG AGTCCCAAGA TGTTTGCTTT TTCCCAGCAA 1140
GAAACTCAGC TTAAGTTAGT 1160