EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16698

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:149310880-149314300

Target genes

Number: 17
Name	Ensembl ID

Gm13072	ENSMUSG00000070572
Lzic	ENSMUSG00000028990
Gm13071	ENSMUSG00000083811
Ctnnbip1	ENSMUSG00000028988
Clstn1	ENSMUSG00000039953
Pik3cd	ENSMUSG00000039936
Tmem201	ENSMUSG00000044700
Gm13068	ENSMUSG00000085403
Slc25a33	ENSMUSG00000028982
Spsb1	ENSMUSG00000039911
H6pd	ENSMUSG00000028980
Gm13067	ENSMUSG00000086665
Gpr157	ENSMUSG00000047875
Slc2a5	ENSMUSG00000028976
Eno1	ENSMUSG00000063524
Rere	ENSMUSG00000039852
Gm13092	ENSMUSG00000085787

TF binding sites/motifs

Number: 13

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX1	MA0782.1	chr4:149311300-149311312	AGACAGCTGTCA	-	6.37
PKNOX2	MA0783.1	chr4:149311300-149311312	AGACAGCTGTCA	+	6.22
RREB1	MA0073.1	chr4:149312859-149312879	CCCCCCCACCCCCCCCACCC	+	6.06
RREB1	MA0073.1	chr4:149312850-149312870	CCCCCATCCCCCCCCCACCC	+	6.1
RREB1	MA0073.1	chr4:149312861-149312881	CCCCCACCCCCCCCACCCCA	+	6.38
RREB1	MA0073.1	chr4:149312866-149312886	ACCCCCCCCACCCCACCCCC	+	6.74
RREB1	MA0073.1	chr4:149312860-149312880	CCCCCCACCCCCCCCACCCC	+	6.8
RREB1	MA0073.1	chr4:149312857-149312877	CCCCCCCCCACCCCCCCCAC	+	7.18
TGIF1	MA0796.1	chr4:149311300-149311312	AGACAGCTGTCA	+	6.14
TGIF1	MA0796.1	chr4:149311300-149311312	AGACAGCTGTCA	-	6.37
TGIF2	MA0797.1	chr4:149311300-149311312	AGACAGCTGTCA	-	6.18
TGIF2	MA0797.1	chr4:149311300-149311312	AGACAGCTGTCA	+	6.27
ZNF740	MA0753.2	chr4:149312864-149312877	CCACCCCCCCCAC	+	7.52

Enhancer Sequence

AGATTCTGTG GGATGTCGAA GGGTAGGGGG CCAGAGTGGG GCCATGTCTA GGCCCAGCGG 60
CCTTTGGCTT TGGCCCTGCG GGAACTTGCC TATTTCATCC AGAGACTGGG AGCCGCTAGC 120
CCAGCCAGGG CACTCATGAG AGTAGAAGAG GTCAAGGCGG GATTTCCCCT TTCCAATATG 180
GCAGAGAGGA GGAGGGGCTG ACTGAAGGAG CATGCAGAGC GCTGTAGCTG AGAAGATAGA 240
GTCTTCAAAG GCCAGAGCTG GGAAGAGATG GCCACCTGGC CCTTCCACTG CTAGCATCAA 300
AGAGTGATAC GCAGACAGAC ACTGTCACAT GGGGCAGGTC AGATCTGGGT CAGTGCTGGC 360
TACACGGGAA GGGAGTGACC TATTTCCAAG GTCCCCCATC AGGAACCTCC CTGGGAGCCC 420
AGACAGCTGT CAGAGCCAGA CAACAAAAGG TGTCTGGGAA GAGTTTTAGG AAGGGTGTGG 480
TGAGGGTAAG AGGCTGGGTA AGTCTGCTGA CTTAACCTAG AGTCGGCTTC CAGGCCAAGG 540
GTCCCAGGCT CCTGCTAGCC ATCAGAGTAG CCACTCTGTA ATACCTGGAC CTATAAGTGG 600
CTTCCCTTGG CCCTCCAAAA CTGTCCACTG ATTTTCAATC ATGATAAAAC TAGCCGGTGA 660
CCCTGACTGC CTCAGATTTG ACTCGGGAAC TCCTTAGCAG AGCATTCCCT AGTCCTTAGA 720
CTCTATTCAG AGATGAAGCC ATTTCTCATC CAGCTTTGAA GAGAACGCAT TAGCCGAGGC 780
TCCCGGGTTG TAGTCACAGA TGTCTGGACT TGATTGGTTA CCAGGCTGGG ATTTTTTTTT 840
TTAATCACAT TTGCCAAGAG CTGGTGAACA CACCATACAG AGGAGGGCAG GTTAATGGAC 900
AGTTCTCCAA TCAGGAATAA ATAAGAGACT ATGGAAAAGT GGCCCAAATC AGAGAGAGGT 960
ATAAACTTTG TATTTTCAAT GTGAGCTGTG ACCTTGACTC AGGACCTGAG AGACTGTGGG 1020
CCTCAGTTTC CCCCTTTCTA CAAACTGGAT TAACAGCCTC GTCTTATAGG AATAACTTGA 1080
AGATTAGAGG AGACAATGCT GGCATCCACT GAGTCCTGAG CCTGACACGT ACCAAGAGCG 1140
GATTAAAAGG AAGTCACAGG AACAGGACCA AGGTAAGGCT CAGTCACCAG GGTAAAGCCA 1200
GGTGTGTAAA GTCCCTTTGA GCCTCTCACA GGATGGGAGT CCAGAAAGGG CAGGAGCATG 1260
ACCCAGCTGT ATATCTCCTG AAGACAGACA GCCTGTGCCC ATATATAAAA CAGATGCCAG 1320
AGCTGCCCCT CCATAGGCCG AGAGGCCACC TGGGGCACTC AGAGGTGGTC CTTTCTGGGT 1380
TTGTTCCTGT GGCTGCTGCC ACCCTCTCCA GGCCTGCTGT GAGCCACAGA GACACCCAGA 1440
GCTGCAGCCC CGGGGCCTAC AACAGTTCCC ACCTCTCCAC ACAGCACACA GTCGGTCGAT 1500
AGTCTTCCAG CTCTGTGTCC TGCCTGAAGG ATCAGGTCTG TGTCCTCCAG CTTGCCTGTC 1560
CATAACACTC TTTCCCCAGG ACCTTGGCCT ACACATCACC ACCCACCTGC CTAGCCTACC 1620
CAATACCACC CAACTGCCTA GCCTACCCAT CATAACCCAC CTGCCTAACA TATTCATCTC 1680
ACCCCCACTG ACTCAGTCAT GTGACCCATA TCTTACTATC TCTGCCATCA GACTGGTCCA 1740
AAAGACAAAG GCACCTTACA GTGGCAAACG GGTGACTTCC ACCCAAATGG CCTTTGATGA 1800
AAAGGGAACA ACCCCACGTC TGTCTCTCAA ACTTCTTACC CCTTCTCAGC TGTGACCCCA 1860
ACACACAGTG ATATGCTATA AAGGTCTGAA GACCCAACTA GGGGACATTT CTCTCCCCAG 1920
CACAGAGGTG ACCTGTAAAT AGATTAGAGC CCATTCCCAC CATGAACACC CCCCCATCCC 1980
CCCCCCACCC CCCCCACCCC ACCCCCGTGC TCCGGGGACC CACCCATGCC TAGCAGGATA 2040
TTTGACATTC CACCACACAC ACACACTTTC TTTGTAAGGA GTTCTGACTC CACCTTGGAG 2100
GACCACTAAC CCAGAAACCC TACACCCAAA GAGCCAGCTA AGCCCCGGGA ATGCGAATGT 2160
TTAAGGCCGG CGGCTGGACC AACCGCACAG ACTAAACTAG GGAGGTTGAA GAATTCTTTT 2220
CGGCTTGGTG TTTTGGGGAC AGTGTTTTGT TTTGTTTTGA TTTCTTTCCT TTTTATTTTT 2280
TTTTCTTTCA GTGGGATAGA GAAGGGTGAA AGGAAATAAG ATTATTTCCA GTAACTGTAA 2340
TTACCCTGCC GCCTCCTTCC CCAGAATCGT GGCCAAGCTA CTCCTCTTGC CTGGAGGGTG 2400
GGAGTGGGGG CTCCTGGGGA TTCAGACTCC TGAACAGGAC ATGGGGTGGC GTGGGGCAGA 2460
GAAGAGGCTT GGGGGAGTGG CAGAGGAGGG GGGAGTCTTT CCCTGGAGCC TGGTAGAACG 2520
AGGTCCCTTC TGCTACTCTG AACTTGTCCA GCGAGAGTCC TATGTATCCT CCATTCCACT 2580
CACTTCACCT CAGGATGTTA CGTCTCAAGA ACACCAGTGA CGTAAACAAA ATGCCTCTCA 2640
AGGAGAAACA AGAACTACAG AGCCTGCCTT CAATGGGCAC GGAGGAGGAC GGTGGTCAGC 2700
TTGTGTGGGG AGAGCCAAGC ATAGTGCCCA CCCTCAGTAG GAAGGTAGAA GTCTGGGTTT 2760
GGAGAAGCCA TCTCTGAGGA GGAAGGAGAC AGACCTGCTC CTTCAGGGAG GGGACATAGG 2820
CTAGAGAGCC AAAGGTAATG TAGTCCACCT TACTAGGTCA AGAAAATCAA TCCCTTGTAA 2880
GCCAGGCACT GTCCTAGACA CAGTGGCTTC AGAACTAAAT GGATGGAGCC TGAGAGCCAA 2940
TCAGTGGATA ACTACGAAGT ATGACCTGGC TAGATCAAAG ATGCTATGTT TTCCACCATC 3000
AGTGAAGAGA TGTGCTAGCT CATTCATTCA CTTATCCATT CAACTCAGTG TCTATCAAGC 3060
ATCCACCGTG TGCGGCCACC ATGTCCCAGC TACTGTTTAA GAGGGCACCC GCCACCCTTA 3120
CAGAGATCAA GCCATGTCTG TGCCTGGAAT GTGCTCTAGC ATTCTCTTTG GGGCCTGTGG 3180
GTTCTTTAGA CACCCTCAGG CCTGATACTG AGGGATGGGA TCAGCTCTAA ATGAGGCTCC 3240
ATAACTCCCC CAGGGTTCTA CTGGGACATT GCCTAAAATG TTTGCAAGAT GAAAAGAGGT 3300
GGGTACTCGC TTCCTCTGTG TTACAAGGAC TGAGACATAC CAAACTAACA GATCACACCT 3360
GGGGACATAA GGGCTCTTGT GGCCACCCCA CATCTCACAC ACGTGAGGCA AGACAGAGGC 3420