EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16678

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:148899380-148901530

Target genes

Number: 22
Name	Ensembl ID

Pex14	ENSMUSG00000028975
Dffa	ENSMUSG00000028974
Apitd1	ENSMUSG00000073705
Pgd	ENSMUSG00000028961
Kif1b	ENSMUSG00000063077
1700121F15Rik	ENSMUSG00000085286
Gm13069	ENSMUSG00000085807
A930028C08Rik	ENSMUSG00000085819
Ube4b	ENSMUSG00000028960
Rbp7	ENSMUSG00000028996
Gm13072	ENSMUSG00000070572
Gm13097	ENSMUSG00000087198
Nmnat1	ENSMUSG00000028992
Lzic	ENSMUSG00000028990
Gm13071	ENSMUSG00000083811
Ctnnbip1	ENSMUSG00000028988
Gm13066	ENSMUSG00000086949
Clstn1	ENSMUSG00000039953
Pik3cd	ENSMUSG00000039936
Tmem201	ENSMUSG00000044700
Gm13068	ENSMUSG00000085403
Slc25a33	ENSMUSG00000028982

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ar	MA0007.3	chr4:148900106-148900123	AAGCACACAGTGTCCCC	-	6.01
Foxd3	MA0041.1	chr4:148899612-148899624	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr4:148899616-148899628	GTTTGTTTGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11482

chr4:148897547-148901525

Placenta

Enhancer Sequence

TGTGCTGGGC ATGCTGGTGT GTTCCTGTGA GCCCAGCACT CCTGAGGCTA AGGCAGGAAG 60
ATCAAGAGTT TAAGGCCATC TTGGCTACAG AGCTAGTTAT GGCCAACCTG TGCTACGTGA 120
CACTGTCGGG AAGGAAGGAA CCTGCTTCCC TTGAGGGTTG CTTTGTCTGG TCCCCGAGGC 180
TTCCTCTCAC TGCAGATCTT TTTCCATCAA CCTGGTGCCT TTTTGGTTTT TTGTTTGTTT 240
GTTTGTTTTT GTCTTTTGGT GTGTTGTTTT CAGGCATAGT TTTGTTTTGT TTTGTTTTCT 300
TTGAGGCTGA GTCTCACTAT GTAGCTCTGG CTGGCCTGGA ACTCACTGTG AAGGCTAGGC 360
TGGCCTCACA CTCAGAGATC CACCTACCTC TGCCTTTCAA GTGCTGAGAT TACAGGTATG 420
TGTCACCATG CCCAGCCACC TGGTGTGTTT AAGTAACAAA TGCGCTGCCT TGATTCTCCG 480
GGATTCTCTT CCTACCAGAC AGGTTTCTCT GCTGCCAGCT TTAAAAACAG GCCTACAGTG 540
GTGGGTGGGC TGTGGGGCCC TCTGCTGTGC CCACAGAGTT CCTCAAGCAA CTTGTGCGTG 600
TGGTACCCCT GCTGCAGGTC AATATGTGCA GAATGGGGTG GGGGCCAGAT TCTTCTTCCC 660
CAAATCTGCC CAGTGCTAGG CCTGTCCTCA GAGACCAAGG TCAGGGAGGC CCAACAGGTT 720
GTGGGAAAGC ACACAGTGTC CCCTCCTCCC TGGCAGAGTG TCAGGGTCGA GAGAGCAAAG 780
GGCTAATAGA GGCGACTTCT CACATTTGGA GGGAGAGGAA GATGGAAGGG CACTGTGGCA 840
AAGATGTCCA TGTCGCTGCG TGGTGCTCAT GGGTTAATGG GCATAGCCTG ATCCTCCAGG 900
CTATGCTGGG GCAGAATCTA TCAGATGGTG GGCGCAGCAA GGGCACCAGG TCACTCAGTG 960
CACCCGCACT TCTTCAAGTG AAGTTGGAGC CTGCGGTGAT CCAGTCGCAG CCTGGAAAAC 1020
GTGACCCACT TCTGCCTCCT CTCCTGTGTG GGGAGCTGTG CAGGAGGCTT TGAGACAGGC 1080
TCCAATTAGG CTTTTCTCAG ACCTGCAAGT CACCTAAGTG TCCAACCATA CATTTCCTGC 1140
CGCTGGAATC CCATGGTCCT TATCCCTGAA CTGAACAAGC AAATGAGCTT ACCGCCTGTT 1200
ATTCTGCAAC CTTGGGCTCC GCCAGCGGGG TTTCCTGTGG AGATCAGGGT CCCTCGTGGA 1260
TCAAACACCT CTCACTGTGT GGTCCCACCC CTGTTCTTCC TGCCAAATCA TGAGGCTAAT 1320
AGTGGACTTG TTTCCATGGC GATAGTTTAG CCCTGCCCAT ACCTAGGTCT CAGTCTTTTG 1380
CTCTAAGCAG TCCAGCTTCC CAGAGACCCA TCCCGGCTAC CACTGTGGGG CTGTGAAATA 1440
AGGGCTGCTT CTAGTTTCTA CCAGATGACA AACACTTCAA TGCCCTTTCA CTTGTTACGT 1500
GTCTGGTGTG TGTATGTGGG GCTGCTGATG TAAACACATG AAGGTAGAGT ACTGCGGGGG 1560
TAATTGGATA TTTATAGCTG ATGAGGTCTA ATAAATCTGT CCCTGATTGA TGCCATTTTG 1620
TTTACAAAGG CAGCTATTAA AGATGGGGAC AGCAAAGGTC AGCTGTGGCA AGGCCATGGG 1680
AACCCTTTCC TAACTGGGTG CTTTCTGGAC TTCTAGACGG AGAAAGAGGA GCCCCTCATC 1740
CTGTCTGTCA GTGTCGGTGA CAGTGCTTGC AGCCTTAGGA ACATGGCCTT CCTCTGGCCA 1800
GACACTGGGG TTGCAGGAAG ATGGGGTGCT GGTGATTTTT AGGAGGGCAT TGTGGGGCTT 1860
TCAGGCAAGT ATCTAGCTGT GAGGCACCCC CCTGCACCCC CATTCAGCTT CCTTTTCAGA 1920
GTAGCCTGCA GGAGCTTTGG ACAGATCTTG ATGGGGTGAA CAGCTAATGC GGAGCTGCCA 1980
CCGCCTCCTG AGAGCCCTCG GGCTGTGCAC TCTCCCTGCA CTTTGGGTAG TAGCCAGTCA 2040
CCGTTACTCC TTGGTCCCCA CAGAGCAGAG ACTTCTGAGG CCTCAGTACA GCAGTGGAGA 2100
ATGTCAGGCA CTGCCCTGGA CCTGCGGGTC CACTCATATT CCTTTGTCTT 2150