EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16582

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:141554250-141554720

Target genes

Number: 10
Name	Ensembl ID

Plekhm2	ENSMUSG00000028917
Dnajc16	ENSMUSG00000040697
Casp9	ENSMUSG00000028914
Efhd2	ENSMUSG00000040659
Fhad1	ENSMUSG00000051435
4930455G09Rik	ENSMUSG00000085761
Gm13053	ENSMUSG00000085574
Gm10565	ENSMUSG00000073728
Tmem51	ENSMUSG00000040616
Kazn	ENSMUSG00000040606

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr4:141554301-141554312	AGAGGGTGTGG	-	6.02
Klf1	MA0493.1	chr4:141554303-141554314	AGGGTGTGGCC	-	6.32
NFYA	MA0060.3	chr4:141554310-141554321	GGCCAATCAGA	+	6.02

Enhancer Sequence

CTTCCTCCAA TAAGGACACA GATCCCTCTC AGACCCAGGA AAATGCCTAT GAGAGGGTGT 60
GGCCAATCAG AGCCTCTGGC ATCAGTCACA TGACCACCTA AGACAAAACA ATGAAAAAAC 120
AAAACAACCC AAACTGATGC TGGGGCTGCT GGCGAGCCCT TGCTCCCAGT GAGCCCGGTG 180
CAGAATCTGC TGAGACAGTG AGTGAGCGAG TAAAGCTGGA AGAGATGGAT TTCTGAGCAT 240
CCGTGGACCA CCTGGATCAA GCCACGCCCG AAGCATATGC TTTCCATCTG GGTTCCTGAC 300
ACGTGACAAC ACTAATACTT CCTGGACAAA ATGCTCCCTG AGACTTCACG CAAGTGCCAC 360
CCTGTGCCCA CAGGCAAGGC GCGCTGCAGG TTCTGACAGG CTTATTGCAC ATGAAACTTA 420
AAATAGTAGC CCAGGGAGGG AGAGATTTAG AGTAAGACGG GTAGTGAAAA 470