EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16482

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:137881270-137881740

Target genes

Number: 11
Name	Ensembl ID

Ece1	ENSMUSG00000057530
Eif4g3	ENSMUSG00000028760
2310026L22Rik	ENSMUSG00000078519
Hp1bp3	ENSMUSG00000028759
Sh2d5	ENSMUSG00000045349
Kif17	ENSMUSG00000028758
Ddost	ENSMUSG00000028757
Pink1	ENSMUSG00000028756
Cda	ENSMUSG00000028755
Fam43b	ENSMUSG00000078235
Mul1	ENSMUSG00000041241

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr4:137881607-137881617	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr4:137881661-137881671	GCCCCGCCCC	+	6.02
ZNF740	MA0753.2	chr4:137881359-137881372	CTACCCCCCCCCC	+	6.13

Enhancer Sequence

AGGTCAGCCT TAATTAACAG ATCAATTCCA AGAAATGTAT AGTCCAAGTC ATAGATAGAT 60
TTTAATCTTT GCCTTATCCC CTGATCTACC TACCCCCCCC CCCAAGGTCT AGGCATGTCC 120
TCATGCTCTT AGACACATAA CTAAGATGCC ACCAGCCACT CAGTCTGGTC CACGAGTACC 180
CCACCCCCTT AAATTGCCCA ATCACGGCTC AGAGACCTGC CCTTCCCAAT GCCCAGGCTC 240
CTACCACGCC CTGGTTCACG ACCCGCCCCT ACACCACTAG GATTCTGAGG CTGCCCCAAC 300
AACTATCCAA CTAACTCCGC CCTTGCTGTC CAATTTGGCC CCGCCCCACC CAGATCACTC 360
ACTCTCCTAA CCCCGCCTCC TCCTGGCCTA GGCCCCGCCC CGGCCCGGCT GGCCTCAGGG 420
CTACACTCTG GCCCGGTTCG GCCCGCTCCC GGCGCTCCCG CCCACCGCCG 470