EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16363

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:134218920-134219440

Target genes

Number: 15
Name	Ensembl ID

Ccdc21	ENSMUSG00000037443
Extl1	ENSMUSG00000028838
Stmn1	ENSMUSG00000028832
Paqr7	ENSMUSG00000037348
2610002D18Rik	ENSMUSG00000078521
Fam54b	ENSMUSG00000046671
Sepn1	ENSMUSG00000050989
Man1c1	ENSMUSG00000037306
Ldlrap1	ENSMUSG00000037295
Tmem57	ENSMUSG00000028826
Rhd	ENSMUSG00000028825
Tmem50a	ENSMUSG00000028822
D4Wsu53e	ENSMUSG00000037266
Syf2	ENSMUSG00000028821
Clic4	ENSMUSG00000037242

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TEAD1	MA0090.2	chr4:134219134-134219144	ATGGAATGTG	-	6.02
TEAD4	MA0809.1	chr4:134219134-134219144	ATGGAATGTG	-	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03784	chr4:134218874-134219711	Cerebellum
mSE_11580	chr4:134218381-134219892	Placenta

Enhancer Sequence

AGGCCACCTC TGCCTTTCTC AGCAATTCTA CAGTTTACAC ACAGGCCATG CTCCTCCGCG 60
GGAGTGGAGA GGTCTGGGAT TAACCACCTG CCAGGGCCCA TGGCTGTAAG TCTAACGGGG 120
GCAACACTGT GTTCCTGGAG TCCTCACAGG TGGTAATTAC AGCTGCCAGC CCGGCTTATG 180
GGGTCTGCTC ACAGCTGAGC AGGCCAGAGA CTCCATGGAA TGTGTCTCAG AGGCAGTTCC 240
TGCCAGCAGG ATCGGCTGGT GTCTAGCCGC CAGTGTGTCT AACCTTGAGA TAAGGTTCCC 300
CACACACAGG ATCCTGAGTC ATGGCCCTGC CTCGGGAGCC TCCACCTTCC CTTGCAGTGT 360
CAGCCCTATC TATCAGGCGC ATTCTCTGTC CACTAACACA GAAGCATCCC ACAGGCTAGC 420
TCAGAGCCGA GGAATCCTGC ATCGCTCCTG TGTCCAGGAG CAGTGAAGAC ACCACACGCT 480
GAACTTAAAA CTGCGACCGC TATTGGCCAG CAATCTGTAA 520