EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16324

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:132933430-132935450

Target genes

Number: 22
Name	Ensembl ID

Eya3	ENSMUSG00000028886
Rpa2	ENSMUSG00000028884
Ppp1r8	ENSMUSG00000028882
Fam76a	ENSMUSG00000028878
Ahdc1	ENSMUSG00000037692
Wasf2	ENSMUSG00000028868
Cd164l2	ENSMUSG00000028865
Gpr3	ENSMUSG00000049649
Map3k6	ENSMUSG00000028862
Sytl1	ENSMUSG00000028860
Tmem222	ENSMUSG00000028857
Wdtc1	ENSMUSG00000037622
Slc9a1	ENSMUSG00000028854
Fam46b	ENSMUSG00000046694
Trnp1	ENSMUSG00000056596
1810019J16Rik	ENSMUSG00000037600
Nudc	ENSMUSG00000028851
Gpatch3	ENSMUSG00000028850
Gpn2	ENSMUSG00000028848
Sfn	ENSMUSG00000047281
Zdhhc18	ENSMUSG00000037553
Arid1a	ENSMUSG00000007880

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr4:132934316-132934327	CTGAGTCATCC	-	6.32
JUNB	MA0490.1	chr4:132934316-132934327	CTGAGTCATCC	-	6.14
STAT3	MA0144.2	chr4:132934687-132934698	CTTCCCAGAAA	-	6.02

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_02819	chr4:132933351-132964657	HFSCs
mSE_10998	chr4:132933056-132936157	Olfactory_bulb

Enhancer Sequence

CCAGAGCTCT GGTCACTCAG CAAGGTTCTC AGCATCCTCT CATGCACCCA TGTGGCTGTG 60
AAGTCAGAGG GAGGCTTGCC TCCTCACCTC CTAGTGTGTG GAGCAGCAAA CCTTAGAAAT 120
GAAGTAGGAG TGTTCTTTTT GTCAGCGTGT GGGAGGCTCT CCTCCACCCC AACCCGAGGA 180
GAGGGGAAGG AGAGAAGCAA CTGTCAGTGG GAACTCCGAG GAAGCAAGGA GAGTGAGGAG 240
GGCTGACCTC AGATCTCAGG TGTTCTGCTT CTTTTGCTGT GGGGATTGAA CCTGGGGCCT 300
TGCCCACCTC CCACCCCCAG CTCTGGTCTT CTCTGACCTT GTGGCTGTAG ATAAGGCAGA 360
CCTCTCAGCC CATCCCCTGG TGTGTGTGAT CTGGTGGTTA ATTATATTAG TGGGTTTTTT 420
ATTTTTATTT TCTAGCTGTT TCTTGTTAAA TTCCTAGTTG AGAGATTCCT GGGTGCTTTG 480
CTTGCACGGT GATAAACAAA CCTAACTCAG GCCAACTTTG GAGCCTGTGA TCTTCTAGTG 540
TCATGTTCAA GGCCCTTTCA ATTGAGAACT TCCATTTTCC CATCATCATT CTGAACTGGA 600
GCCTTGAAAG CCTTGAATAT TCTTCTGTCT TGCTCAGTTT TAAAAAAAGG GTTTAGGGAA 660
AACTGACGCA GTCCAGGGTC CACGGTGAAG AAATAGCCAT CTAAGAGGTA GCATTCATAC 720
ACCCAGGAAT GACTGGGACC TAGGGCAAAG GGGCCCCAGA TGCCCTCTGG GGAGAGCCTG 780
CACTCAGCCT GCAGCCGGGC TCCTCCCTCC TGTCAGCCCC CCACCTGCTT TTCTTCTGAT 840
CTAGGCAGAG AAGTCTCGCT CAGCACAGGC AGGGCCCGGG TTACTCCTGA GTCATCCCGC 900
CCGCCTGCCC GCCCGCCCGC CGTGTGGGCT CCTCCTGCGG CTCTAGCTCC CTCTGCAAAT 960
GTCTGAGTCA GACGAGTCTC CCCAAGGTTG TCTGCACACA CCGCACTGGG CCAAACCGTC 1020
TCTTTAGATG CCAATAAACA TCAACTGATA CTTTAGGCAG CCTGTGATTA TATGTGGGTA 1080
TTTTTAATCT TATGGGCTAA TCTAATTTTA ACTGAACTAA GTTTTAGGTT GGCCTGGATC 1140
AGTGGGCTGC CCCTCTTCTC TGGAATCCTG CTGATTTCAT TTCCTCCCCC AAGCCCATCC 1200
AGCATGCAGG ACTGGTTTTG GTTATCAGGC TGGACTGATC TCTGAATTCT AATACTGCTT 1260
CCCAGAAAGC AGGAGCTCCC CAGATCATCC CAGCAAATTC CTGTAAATAC ATGTCCTCTG 1320
GTGTTCTGAC TGAGGGCTAG GGTGAGGAGT TCTGTTCCTT CCCAGGCCTC TCAAACTAGA 1380
GTGGCTCTTC TGTAATGAGA GGAGTCTGTC TGACATCACA GCTTTATGTG TGACAGAGCC 1440
CAGAAGTTTA CCAAACCCAG TCAGTAGCCA GCACCACTTG TGTAGCCTTT GCTGCATGCA 1500
GGGTAAGGCT TGGGAAGGCT GTGTCTTTTG TGCTGGCTAG CCTGAAGAAA AGGAGGCAGG 1560
AGAGACAGCC GTGGTAGTCT GCCTGCAGGC TCTTAGCTTG CACTCCTCCA TGCACTAGAA 1620
AAAGTAAAAC TGGGCCCTGT TCAGCAGGCG CTCGCAGTGT GCTCAGGGCT GGACGAGATG 1680
AGACAAGACA TAATAGATGT GATGTGTCTG AGGGCTGGGC AGACTCTTGG CAGAGGGCAA 1740
GTTGAGAGGG AGTGGGCAGT CCCTGAGAGC TGCAGTGGTA GAGGAGGTGA GGTGGGACCT 1800
GAGTGGAACC TTGGAGGGAA CGAAAGCAGA GCAACGTGCT GTACTAGAGG CTGACCCCGT 1860
CCGTCCATGT GGGCGAGCAT GGGAGCCCCT GGAAGGCAGG GCCTGTGTGC TTGCTTCCTT 1920
CTGCTATCCC TTCCACCCCT GCCCTCTCAT TCTACCTCCT TTCTTTGTCT CTGTCCCCCC 1980
TCCCGCTTGT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT 2020