EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16238

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:129732730-129733230

Target genes

Number: 21
Name	Ensembl ID

Marcksl1	ENSMUSG00000047945
Hdac1	ENSMUSG00000028800
Eif3i	ENSMUSG00000028798
2510006D16Rik	ENSMUSG00000028797
Iqcc	ENSMUSG00000040795
Ccdc28b	ENSMUSG00000028795
Txlna	ENSMUSG00000053841
Tmem39b	ENSMUSG00000053730
Khdrbs1	ENSMUSG00000028790
Ptp4a2	ENSMUSG00000028788
Gm10571	ENSMUSG00000073753
E330017L17Rik	ENSMUSG00000086369
Bai2	ENSMUSG00000028782
Gm12963	ENSMUSG00000085517
Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Tinagl1	ENSMUSG00000028776
Serinc2	ENSMUSG00000023232
Fabp3	ENSMUSG00000028773
Zcchc17	ENSMUSG00000028772
Snrnp40	ENSMUSG00000074088

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr4:129733012-129733027	TGTGGCCTTGAGCTT	-	6.12
ZNF740	MA0753.2	chr4:129732773-129732786	GTGGGGGGGGGGC	-	6.29

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_05952

chr4:129732255-129734031

E14.5_Limb

Enhancer Sequence

TAATGAGGTG AGCCTTTTGT CTGCACGGGA CTCTAGGATT CTGGTGGGGG GGGGGCATCA 60
GTACTCCCTC CTTGGATAAA GAAAGGTTTG AGGCTTGGAG CCTAAGGTGT GGGGGTGATG 120
GATAACGGAA ACACCCAACA TTCCAGAGGG CCCAACTCTA GGCCTTGATT GCCCTGGATT 180
GTAGGGTGGA AGTCCAGGAA GTCACTCCTG CTGAGTTGGA GGCCATGGGT ATCATGGGGA 240
AAATATGTCT TAGCTGCGAA ACCCTTCTTC CCTGACACAC TGTGTGGCCT TGAGCTTGTT 300
ACTGTTTTAC TGTTTCTGTC TCGGCTTTCT TTTGTTCCTT TTAAAGAGGT GCTCTTTGTA 360
CCTTGAGAGG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 420
CGCACGCGCG ATGCACACTT GTGCTGGGTA GGGCTAATCT CAGAGGCCCA GAATTGACCT 480
GCAGGCCTGT TCTTGCTTTT 500