EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16195

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:128797900-128798460

Target genes

Number: 29
Name	Ensembl ID

Phc2	ENSMUSG00000028796
Zfp362	ENSMUSG00000028799
Trim62	ENSMUSG00000041000
Adc	ENSMUSG00000028789
Ak2	ENSMUSG00000028792
1700086P04Rik	ENSMUSG00000085085
Rnf19b	ENSMUSG00000028793
Tmem54	ENSMUSG00000028786
Hpca	ENSMUSG00000028785
Fndc5	ENSMUSG00000001334
S100pbp	ENSMUSG00000040928
Yars	ENSMUSG00000028811
C77080	ENSMUSG00000050390
Gm12976	ENSMUSG00000087575
Sync	ENSMUSG00000001333
Rbbp4	ENSMUSG00000057236
Zbtb8os	ENSMUSG00000057572
Zbtb8a	ENSMUSG00000028807
Zbtb8b	ENSMUSG00000048485
Bsdc1	ENSMUSG00000040859
Marcksl1	ENSMUSG00000047945
Hdac1	ENSMUSG00000028800
Lck	ENSMUSG00000000409
Fam167b	ENSMUSG00000050493
2510006D16Rik	ENSMUSG00000028797
Iqcc	ENSMUSG00000040795
Ccdc28b	ENSMUSG00000028795
Txlna	ENSMUSG00000053841
Tmem39b	ENSMUSG00000053730

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2C	MA0497.1	chr4:128798097-128798112	GTGCCCAAAATAGAA	+	6.12
REST	MA0138.2	chr4:128798282-128798303	GTCAGGACCCTGGAGAGCGAC	+	8.2

Enhancer Sequence

GAGGAAATGT GCAGGGCTGA GCAAGGGAGT GTGTCCCTTA CTCCCCTCCT CAAGGTCCAA 60
GGAACTGGGT CAGCGGGGCG GGGGCAGAGT GATGCGCTGA GCAGAAGCGC TCCTCCAGGT 120
GCCCCTTCCT CTCGGCCACC CTCAGCATTT CCTTTCCCAG CTGGAAGAAA TGCCTGTTTT 180
CTCCTCAAAG ACCCCCAGTG CCCAAAATAG AAGGAACCTC ACAGCTCTAT CTGAGAAACC 240
CGCCCTAGCA TCCCCTCCAA GCCTCCTCCG GCTCCAGCCC TGATCCCCCG CCTCCATTCT 300
TCCCGCACTG GGTTCGAGGT CCCTCCTGGA GGGGGCGCCC GGGACGGTCG ACGCGCGACT 360
CCCAGGAGCC GGCCACTTGG CGGTCAGGAC CCTGGAGAGC GACGCGCGAT TTCCCCAGGG 420
GCAGCCCCGG GCTTGCAGCG CCGCGGGTGG GAGGAATCCC ACGAAGCTCA GGGAGGAGCG 480
GGCTGGGGAG CCCTGGACTT GGGTTCCTGG CTCCCGGGCT TCCCTCCCCT CATCCCCGAC 540
CCCGGCCAGA GCGGCCCCCA 560