EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16155

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:126296660-126298350

Target genes

Number: 18
Name	Ensembl ID

Mrps15	ENSMUSG00000028861
Oscp1	ENSMUSG00000042616
Lsm10	ENSMUSG00000050188
Stk40	ENSMUSG00000042608
Fam176b	ENSMUSG00000050212
Thrap3	ENSMUSG00000043962
Mtap7d1	ENSMUSG00000028849
Trappc3	ENSMUSG00000028847
Col8a2	ENSMUSG00000056174
Adprhl2	ENSMUSG00000042558
Eif2c3	ENSMUSG00000028842
Eif2c1	ENSMUSG00000041530
Eif2c4	ENSMUSG00000042500
Clspn	ENSMUSG00000042489
5730409E04Rik	ENSMUSG00000073755
Gm12933	ENSMUSG00000081210
Psmb2	ENSMUSG00000028837
Ncdn	ENSMUSG00000028833

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr4:126297815-126297830	TGGCCTTTGTACTCA	-	6.26
Myod1	MA0499.1	chr4:126297403-126297416	AGGGACAGCTGCA	-	7.82
Myog	MA0500.1	chr4:126297406-126297417	GACAGCTGCAG	+	6.62
Tcf12	MA0521.1	chr4:126297406-126297417	GACAGCTGCAG	+	6.14
ZNF263	MA0528.1	chr4:126297542-126297563	GGGGGTGGGGGGAGAGGGAAG	+	6.3

Enhancer Sequence

AGGACGTTGG AGATACTCTG GGATCTGAGC CAGACCTCAC AAACAAGCTG GTCTACATCT 60
CCATACCCAC GGGTGCTGGC AGATAAGTAC CCACGTCTGT GTATGCACAC ACCTGCACCA 120
TCGCTCACTC CGGACACAGA CTTTCCTGCA CGACCCACCA ATCCCTCAGG GATAAGACTG 180
CAATTTGCTC CAGGCCTGAG GATTCTCCAG CTAGACTTTG ACCTATCCCA CCCAGAACTT 240
CCCAGATTCT CCCACCTTCC CAATCCTACT CCTTCCCACC AAATGCTTAG CCTTTGAGCT 300
AGTTCATCTC CTAATCTGTG TGTTACATCA CTCAAATGTG AGGAAAGATT CCTTGGATTG 360
AGCAACTGGC AGGGGAATGG GACCGGAGTG GCGCGGGAGT GTTCATTGTT TTGAGGTCTG 420
GCATGTTAGA GTCTGGGAAG GGGCTGAATC CCTGGGGACC CGTCCAGTCA TTAAGGACCA 480
GCGAGGGCGT GGTGAGGGTA CGTTCAGCTG ACGTTTGGAG GTTCCCGGGC GGGGCACAGA 540
CAAAGGGGTG GCCTCCCAGA GCGGGCGGCC CTCGCACAAA GCCAGAGGTG GTGGCGCCGG 600
CCGCCCCACG CGTCGGGCTG CACCGGGCTC CTGATCATCA CGGTCCCGAG CGCTTTTCCC 660
TATGCCTAAT CCCAACAAGC ATGAAAACAA GCATGAAAAC GGCTCGGTTT GGCCGCCAGC 720
AGGCCCTTTG TCTCGGCCCC TCGAGGGACA GCTGCAGCCA GAGCCCCCTC CCCTCTTTGT 780
GTCTGGTTCC CTCCGCCCCC GTCACCCTCC TCACCTCAGC TGTCCCCTGG CTCTCGCCTC 840
CAGCACCTGG GCGCACAAAG CTGGGCGACA CCCCTGCTTT GGGGGGGTGG GGGGAGAGGG 900
AAGAATTAAC CCCAGGGTTT GCCCGAAGGT GGAGAGTGAG AGAGGGCTGC GGAGTGCATC 960
CTTCGCTGCG GGATGCGCGG GACAAAAGCC CCCAAGCAGA AACACTGGTA GGAATGGATT 1020
CATGGGTGTG AGTTAACCGG GCTGGTGGAA ACCTAACATT TTTGTTAAAC AACTAGGGCT 1080
AGGAACTCTC CCCTAGACCT TGTGTCCCCT TGGACACAAC TCTTAACCAT CTGAGGAGCT 1140
ATCTCCTCAT CTCTGTGGCC TTTGTACTCA CCTATCCTCA AGGACCGCCA AAACCTCCGC 1200
CTCCCTCATA TTCCTCCGTC CTACTTGAAT ATCAGTCTGC CCTCTGTGCT CTACATGCAG 1260
CTGGCCCCAG CTCTTCCTGC TTCTGGGGGA ACCGCACGAG TGGAGCTCTT TTTTTTTTTT 1320
TTTCTCCCTC ATACAGCTGC TTATTCCACA AGGTCATGGC TTGAGAGAGG TGTGTGGGGT 1380
AGGCCTTCGA GCCTTTCTCT CTCCCTCTCA AAACCAGTAG TCTCACTTGG ACGACCTAGA 1440
TCCAGGTACT GTAACCCCAC ACCTGAAGAA CTAGACTAAC CCTCCCTCTA TGCAGAGCCT 1500
AACTCTAGCA TGGGCTTCTA TAGGACAGAC ATGGCCACAG CTTCCCTCGG ATTTAGGACC 1560
ATGCCACCGT TCTCCTCCAG CAGCTTCAGT TACTTAGTGT GTTGGCAGGG CCTCATAGTC 1620
TCTTTACAAC ATCGACATAA TTTTCTCAGG GTCTCATGTT CCCACAAACC CATAAAACCT 1680
TTCTCAACAG 1690