EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16134

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:125637260-125638740

Target genes

Number: 15
Name	Ensembl ID

Csf3r	ENSMUSG00000028859
Mrps15	ENSMUSG00000028861
Oscp1	ENSMUSG00000042616
Rpl28	ENSMUSG00000079942
Lsm10	ENSMUSG00000050188
Stk40	ENSMUSG00000042608
Fam176b	ENSMUSG00000050212
1700029G01Rik	ENSMUSG00000073758
Thrap3	ENSMUSG00000043962
Mtap7d1	ENSMUSG00000028849
Trappc3	ENSMUSG00000028847
Col8a2	ENSMUSG00000056174
Adprhl2	ENSMUSG00000042558
Tekt2	ENSMUSG00000028845
Clspn	ENSMUSG00000042489

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr4:125637536-125637551	AAGTCCAAGGTCAAG	+	6.29
RREB1	MA0073.1	chr4:125638716-125638736	TGTGTGTGTGTGGTGTGTGT	-	6.16

Enhancer Sequence

TTATAACTTT CCCTTTCACA CCACTGAAGA TGAGGGTTGG ATGAAGCCAA TTACCGGGAC 60
TTCCTCCCGG TGCCTGCTCT GAGGTCAGGG CTGGAGGAGT CAGAGGAGCC TTGAGGAATT 120
AAAACCTGGC ATCTGTCACC TCAGGCCCAG AGCCAAGGCA CTTCTTGCAT GGAGACATAG 180
GGCCATGGGT AAAAGAGGGG CTCCAGAACC ACACCCCAGA TAAGCAAGAT GGCCTCTAGC 240
AAGACACATC TACTTCTTGT GGCTCTAGAA AGAGAGAAGT CCAAGGTCAA GGTGACAATG 300
GAGTCCAGTG TCTGCTGAGG TTCACCATAG AGGCTCCATG ACAATCCAAA GTCCTGCCCT 360
GTAGATCCAC AAAGAGGGGG CTTGGTATCC TCCCATGGCT GGAAAATCCA CTCTGTTCAT 420
TAAGCCTGAG CTTGGCCCCT TCCTTATTGA AGGGGCTGCC AAATCCCTTT TTGGTCACAT 480
GCTCTAGCAT GGACTGGGAG ATCAGCACCC ACAGCCAATC TCCACCACAC ACACCACAAC 540
ATGGCCTCAG ACCATCCTAC AAGCATGCTG CCACCTAGAA GGCCATTTAG GGTCCTGGTG 600
ACTCTTGGTC ACTCAGCAGG CATCCCTAAA CAGTGGCGTG CATGCGAGTT TCAACAGGGC 660
TAACACCAAT TAAAGAATCA GGTTCTTGTC ATACCATTCT CAGCTCTCCT CTGATGGACC 720
AAAGGGTCTT GGGGCCCGGG CTAGACGAGG GATGGAACTC ACCTCTCTGG TGTGGCCCCA 780
CCTCCCAGAA TAGGAACAGC TCTTCCTCCC TCCTAACAGT GCCAGGGAGC TGCAGATCCT 840
GCTCTCTAAT TAGACCTGTC GCCAGCCGGA ATCACTCCCA GGCTGGGCTG GGGAGGTCAT 900
TAGCTGGAGA TGGATAAGTG CTAAGCCAGC CCCACTCTGG AGATTTACAA GGCACGGGCG 960
AGGGAGGATT TATAAGGTTT GTTAAATTTC TAATTGAGTT TAGAGTGCTA TGCCACAGTC 1020
CCGGTGACCA AGCTGCACAG GCGAGAATTA AAACAAGTGC CCCTATCCCT CACACTGTAA 1080
GAGGACTGTG GCCTCTGCCT CACCTGGCTG CACAGACAGA GGCTGCCCAA AGATGGTGTG 1140
GTCCAGCAGG CAACCCCAAA CCTGCCCCTC AACAAGTTCT GTCAGTTCCT AGGCCTGACC 1200
ACAGTCTGCA GGGTCTGCCT GGGCAGACTG GCTTGATTTC TTAGATTTGT TGTTTGTTCA 1260
TTGGGGGTCA GAGTGTAGGT GGGGGTATGT CCGTGTTGGT GCAGTAACAT AGGGTTACAT 1320
GTGCCTGTGA CTGTATGAGG TAATGGTTCA CCTCTGATCA GCTGAGGTAG CAGCCGCCCT 1380
GCAGGGGGTT TTGATGTTGT AGTTTGGAGG GGGAAGTGTA TTTGTTCTGG TGTGTGTGTG 1440
TGTGTGTGTG TGTGTGTGTG TGTGTGTGGT GTGTGTGTGT 1480