EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16028

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:117712620-117714690

Target genes

Number: 20
Name	Ensembl ID

Rnf220	ENSMUSG00000028677
Eri3	ENSMUSG00000033423
Dmap1	ENSMUSG00000009640
Gm12844	ENSMUSG00000084260
Slc6a9	ENSMUSG00000028542
B4galt2	ENSMUSG00000028541
Atp6v0b	ENSMUSG00000033379
Dph2	ENSMUSG00000028540
Ipo13	ENSMUSG00000033365
Artn	ENSMUSG00000028539
9530034E10Rik	ENSMUSG00000086554
St3gal3	ENSMUSG00000028538
Kdm4a	ENSMUSG00000033326
Ptprf	ENSMUSG00000033295
Hyi	ENSMUSG00000006395
Szt2	ENSMUSG00000033253
Med8	ENSMUSG00000006392
Elovl1	ENSMUSG00000006390
Cdc20	ENSMUSG00000006398
Ebna1bp2	ENSMUSG00000028729

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr4:117713946-117713957	AGGCCATAAAA	+	6.02
FOXP1	MA0481.2	chr4:117713021-117713033	CTCTGTTTACTT	-	6.37
FOXP2	MA0593.1	chr4:117713022-117713033	TCTGTTTACTT	-	6.32

Enhancer Sequence

ACTTCCATGA ATGGGAACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC 60
AAGGCAGAGC TCACCTCACC CAGTATCTCT AGCACCTAAC ACAGGGTCTG GTACAAAGGT 120
GGGGGTCCAT AAATATGTTG AATGAGTGGT GTGACTAGGG GGGCCTACAG ACTAGCTGGG 180
GACATGGATC CTCTGTTCTT TTCTACTCGC GGGGAGGGGC CAGTGCCAGT GGTGGCAGCA 240
GTGGTAGGTA TGGTCCTTAG CCTCTCTGGG TCAGTCATCT TTCACAACAG TGACTGCCTA 300
GCTCTGCCCA CTCCTGACTC TCAGCCCGCC CAGCTGGTGA CACCGCAGAC CCCCACCTAC 360
TGAGGGTGTC CCATGACTCT GCTTAGACTA ACTGTCTACG TCTCTGTTTA CTTTCCCATA 420
CGTTGCCATT TTCTGATTCT TGCTTTGGGG TTCCCTCTGA GAACCCCTAA CTTGTCAGCA 480
CATCATTTCT AAAGGCCTGA ACTTCAACCT CGTCCACGAA GAGCCCTGAG CATCCCAAGC 540
TGCACGCTTT ACACATACGA GTTCTTGGAA CTATGTGCTC ATGCTGCCTG CAAAGGAAAT 600
GCCACCTCAA ACATACCAAT GCTCTGGGGA CAACTTGCCT CTGAGGTAGC CCACAGGACA 660
GTCCAGGTCT CACCACCCTG AGCACATATC TGCCTACAGT CAGAAGATCA TGGGACTCCT 720
GAGTCTACCA GGCTCAGAGC CACTGACAGC CACAGACAGC TGATACAGCA GCGGAAAGCA 780
CTCCTCTCCC TGACACCACA GCAGCAAGGA GGCAGCTGCA CACGGAAGGA AAAACGCTTA 840
GTCTCTTGGT GGCTTAGGCC TCCTGCTTCA GCCAGGCCAG TAAATGCAGG GTAACACAAT 900
CTACCAACCA AGGAGCACAT GTGTCCTGTG CCTGGCTCCA GGCGGGAAGT GGCCTGGGTG 960
ATACCAAGCT CTGCCCTTCT CCAGCACCTG CACCAGGTCA GAGCTGTGAA TGTACAAAGT 1020
GCTTTTGCAG ATGCTGGGAG CCTTTGAAGT AAACTGTTAA CTCTTTCAGG GATCCTACAA 1080
AGGGATTAAG TATGTCTTTT GGGTCACAGT AAGAGTCATA AAGTATTGGT GGGGGAGAAC 1140
CCTAGAGAAT TTGTAAACCT CCTGGAAAGT TCAGAAACTG AGCATAAAAA GCAGGCCACG 1200
AGCAAACTGT GTGCATGCAT CAAATAAGGA ACACTTCCCT TACTGCGCGG AATTTACTGA 1260
ACTACATGTC ATGCACAATA GGTCTGCTGT CATTAAACAG GCAAACACAG GAGCCGCTGA 1320
AAAGTCAGGC CATAAAACCA GTGGGAACTC AGAAGATTTG AACGGGACAA TTACTCACTT 1380
TGAACCAACT AAAGGGCAGA GAGCCCCTCA CCCAGCCTGT AGAGAACATC CTTCCAAGCG 1440
TGCAGTGACC GTTTCTGAAA GGGATGGAGG AGGGGGTCCA AACGGGGCTC AGCCCCCGAT 1500
CCTAGTGTAA TTTACAGTTA CATTCTGGAA GGATGACCAG TGAAAGTACC TTTTCAGAAA 1560
CATTACGGTT CCGGGAATGC ATACATCTAA TCATGGGTGG CAAAACACCC GCGGCACCTT 1620
GATGCATGTG CTTGCTCTCA TGTCTGAGAC ATCTGCCAGA CTCTGAGCTT TCAAAGCACG 1680
ACATCTGTCC ATCCTTCAAG TGAAACAGTG CTCCTGAGAG GTAGACAGTC TGGTTGGTAA 1740
CAATCACACA AGGGCCTTTT CGTTAAGACA ACCTCTTTCC TTGGCGCATA GCAAGGGTGT 1800
CAGGCACACT CCCGTTTCCT CACACAGAAT ACCAGAGAGA TGTGCACTCC AGGGGGAAAT 1860
CTAATAGAAG TCAGAACTGC TGGGCAGGGG TGTAGCTAGG GGTAGAGGAC TTTCCTAACA 1920
TGCTGGAGGC CCTGGCTTTA ATCTGCAACA CTGCGGACAA ACTGCTTCAT CAAGAATTGG 1980
TTCTAGGGGC TGGAGAGATA GCTCAGAGGT TAAGAGCACT GGCTGATCTT CCAGAGGTCC 2040
TGAGTTCAAT TCCCAGCAAC CAACGTGGTG 2070