EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16012

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:117287840-117288590

Target genes

Number: 23
Name	Ensembl ID

Urod	ENSMUSG00000028684
Eif2b3	ENSMUSG00000028683
Rps8	ENSMUSG00000047675
Kif2c	ENSMUSG00000028678
Tmem53	ENSMUSG00000048772
Gm12843	ENSMUSG00000085749
Gm12828	ENSMUSG00000086876
Gm12827	ENSMUSG00000087228
Rnf220	ENSMUSG00000028677
Gm12826	ENSMUSG00000083446
Eri3	ENSMUSG00000033423
Dmap1	ENSMUSG00000009640
Gm12840	ENSMUSG00000086320
Gm12844	ENSMUSG00000084260
Klf17	ENSMUSG00000048626
Ccdc24	ENSMUSG00000078588
B4galt2	ENSMUSG00000028541
Atp6v0b	ENSMUSG00000033379
Dph2	ENSMUSG00000028540
Ipo13	ENSMUSG00000033365
Artn	ENSMUSG00000028539
Kdm4a	ENSMUSG00000033326
Ptprf	ENSMUSG00000033295

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr4:117288418-117288429	TCTTATCTCCC	+	6.62
PBX1	MA0070.1	chr4:117288559-117288571	ATTGATTGATGG	-	6.62

Enhancer Sequence

AAAAAGGTAC CTCTGAGCTC CTCCCAGGGC CTTTGGTTCT CCTGTCCTTC ACCACCACCC 60
CCAACTCTGG TGTCTTTTTG TTTCTTTTCT CAATATTCCC CTTTCTCTTC CCTGGGTAAT 120
CTGTACTGAA CTATTGATAT TTCTGGGGAG TGGGAGCTGC CTGAGGGTCC GGCTGCTGGG 180
AGGAGTACTA TTGGTGTCTT CCAAACATAC ACAGAGCTTT TTCTTCTGAA TCTCTGGGCT 240
GAGCTGTGTA GTCACTAGGA GAAATATGGT TCTAGTTGAG CCTTTCAGAA GGCAGTCTGT 300
TGGGTATAGT TCTTTATGCT CTGTGCAGAC CTTACTGCCA GCCCAGCCCA AGTTCTCTCT 360
GATCCACAAA TGAAAGACAG GTGCGTGCAG TCACATACTA GCTTATTTTT AAACCCGCCT 420
TATTGGCTCA ATTGCTGGGC TCGTCTAAGC CTTCCTCGGC TATCTCCGGC CTTTATTTTC 480
ACTCCCAGCT CAGCACCTTA AATCTGCCCT CAACTTTAGC CTCTTAGTTA CCTTCTCCTT 540
GATCAGCAAC CCTAAACTGC CCTCCACTTA GTTGTGTTTC TTATCTCCCT GTGGCTGGTC 600
ACCTTTTCTC CCTCCAAAGC ATGGCAAAAA TCTCCCTTTC TCTTCCGCTT CCCTTGGCCT 660
CCTGCAGAGA CCCAGAAGTC CCAATTCTTT CCTTCTGCCC AGCAATTGGT TCCTGGCATA 720
TTGATTGATG GATTAAGAAC CAATTAGGGA 750