EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-16011

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:117285200-117286780

Target genes

Number: 20
Name	Ensembl ID

Rps8	ENSMUSG00000047675
Kif2c	ENSMUSG00000028678
Gm12843	ENSMUSG00000085749
Gm12828	ENSMUSG00000086876
Gm12827	ENSMUSG00000087228
Rnf220	ENSMUSG00000028677
Eri3	ENSMUSG00000033423
Dmap1	ENSMUSG00000009640
Gm12840	ENSMUSG00000086320
Gm12844	ENSMUSG00000084260
Klf17	ENSMUSG00000048626
Slc6a9	ENSMUSG00000028542
Ccdc24	ENSMUSG00000078588
B4galt2	ENSMUSG00000028541
Atp6v0b	ENSMUSG00000033379
Dph2	ENSMUSG00000028540
Ipo13	ENSMUSG00000033365
Artn	ENSMUSG00000028539
Kdm4a	ENSMUSG00000033326
Ptprf	ENSMUSG00000033295

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2

MA0465.1

chr4:117286067-117286078

TTTTATGGCCT

6.02

Enhancer Sequence

GTGTAGCCCT GGCTGTCCTG GAACTCACTC TGTAGACCAG GCTGGCCTCG AACTCAGAAA 60
TCTGCCTGCC TCTGCCTCTG CCTCCCAAGT GTTGGGATTA AAGGCGTCTG CTCTCTTGCT 120
GGACCTGCCC TTTGGACTGT CTGTCAAACC TCTTCGATCT CCTTGACGCA GACCTAGCAA 180
TGGTCCCCCA TGCTCTGCTC ACCTGATCTT CAAAGTTGAG CTCCTACTTC CAGTGGTTCC 240
ACCTTGGCTA TACCCATTAG CAAGGGGTGG GGTGTGCAAC CTCCCTTAAT GAGCAACTCC 300
CCTGCTTTGG CTGGCGCCAA GCTAGCCACA CCTGTTTGCT ATCAAGGCTG TCTGGGCCAG 360
ACCAGAGCGG TTCAGTTGCA GGTGGTAGGC CTGAGTGAGG GCTGGGGTGG GGAAGGTGGG 420
ACTCCCTTTG CTTTGTTGTC TGTTTGTGGG GAGAGACATT TTCTAACAGC GCTATCCTCC 480
CTTATCCTTT CTTCTTTCAA AGTAGAAGTT CTCATTTTGT TATTTAAAAG ATCAGTAGGA 540
AACTTAAGAA GTACCTCATC TTTCTCTAAC TTCTGCCAAT CAGAAGCAAG GATCCTGGAA 600
AACATCTGAT GATAGGTTTG AGGTTCTGTT CTGGTGACTT GAAGGGCCAC TGTGATCAGA 660
GCAAGACCAT GATAAATGCC AAAGTAGGGC CCCTTCTGCC TCTAGCCTCA TACCATTTGA 720
AGAGTGATCA TGTACCTTGC TTTAGAGCCC ATAGGCAGGA CTGACTGCCA TGCATGTGTT 780
GGGGTGAGGG GTGTCCTTAA AAGGGGCCTC CTTGTATTCA TGAAACTGAA GGAAGTTTTG 840
ATTTGGTGGG GGAAAAATCC CATTCCTTTT TATGGCCTGG ACATAATTGG GTTTTTTCTA 900
TTGGCCATCA GTGATGTCAT TCCGACCCCT CATAAAGAAG GGGAAATCAC ACCTGTGGAC 960
TCGGTGCATA AAATTTCATT GGGCAACAGT AATAAGCATG ACCAGATGAT GTTTGGGCAG 1020
TTGGGGAGCT TTGTGCCCAG TGAATCCAGC TGCATGGAGA CCTGGGCACC ATAAACTTGC 1080
CTGCACGTTT ATGCCCGTAG GCTAGTTCAG GGCCCACTGC CAGTGGCTCT TTTCCTTGGG 1140
ATCAGTATCT GGCAAAAACT CAGCATTTTC CCCTTAGTGC CAGGAACCTT TGCCCTTTTC 1200
TTTGCCAACT GGTGGAACCA GGTGTCTACT GGGACCTGCT GACCTTAGCC TGAGATGCCT 1260
AAGAATATTG AGTTAAAAAA ACAAAACACA AAAACTATAA CCTTTAGCAG TAAACTCCAT 1320
CCTACCTACC TCTACAAGCT TTGCCTTCTC CAGGACGAGT CAAGGCCTCT CGCTGAATAT 1380
GTGCAATTGT CACTTGCCAT TCCGAAGCCC CAGAGTCCAT TTCTAGTTCT CTTCTTGGCT 1440
TGTTGCATGA TTGAGCAAAT CCCTTTTCTT TACTGAATCT GTTCCCTCGT TTGTATAAGC 1500
GATGGTGACC ACCCTAACCC ACCTTGTGTG CTCTGTTATG TGATAGAGAT GTATAGCTAT 1560
CTTCCTGTGA GACTCCTGCA 1580