EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-15997

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:117051990-117053840

Target genes

Number: 22
Name	Ensembl ID

Toe1	ENSMUSG00000028688
Urod	ENSMUSG00000028684
Eif2b3	ENSMUSG00000028683
Ptch2	ENSMUSG00000028681
Btbd19	ENSMUSG00000073771
Plk3	ENSMUSG00000028680
Gm13015	ENSMUSG00000070834
Rps8	ENSMUSG00000047675
Kif2c	ENSMUSG00000028678
1700012C08Rik	ENSMUSG00000086482
Tmem53	ENSMUSG00000048772
Gm12843	ENSMUSG00000085749
Gm12828	ENSMUSG00000086876
Gm12827	ENSMUSG00000087228
Rnf220	ENSMUSG00000028677
Gm12826	ENSMUSG00000083446
Eri3	ENSMUSG00000033423
Dmap1	ENSMUSG00000009640
Gm12840	ENSMUSG00000086320
Gm12844	ENSMUSG00000084260
B4galt2	ENSMUSG00000028541
Ipo13	ENSMUSG00000033365

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr4:117053079-117053090	GGGTGACTCAG	+	6.02
JUNB	MA0490.1	chr4:117053079-117053090	GGGTGACTCAG	+	6.02
POU1F1	MA0784.1	chr4:117052578-117052592	CTCATTTGCATACT	-	6.57
Pou2f3	MA0627.1	chr4:117052577-117052593	CCTCATTTGCATACTA	-	7.24

Enhancer Sequence

CAAACAGGCG GAAGGTGGGA CCCACACCTG TCTTTTAATC TCTACATAGG AGCGATTGTG 60
TGCGCACTCA TGCACACGCA CACGCATACA CATGCATACA CGTATGTGTA CAAGTACACA 120
TAAGATAAAG ACCCGCTGTG CATCATGGCT GGGTCTCACT GCTACTTGCA GGACTTGTGC 180
ATGGTGTGTA CACATAAGAT CAAAAAGAAA AACGCAGAAA AGGGAAATTT TTCTTTTAGT 240
TTGGTGACTG GAAGTGGAAC TGGGCTCCCA GCATGGTCAT TGGGTATGTT CAGATCAAGG 300
CTTGAAGACC TGTTTGACCA CTATCAAATT TGAAGGTCTG ATGTAGGAAG GGATTGGTTG 360
TAGACCAAGC AACCATGCAA GGGAGTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT 420
CTCTCTCTCT CTCTCTCTGT ATACCAAGGG ATAGATGGGA GAGAGAGATA AAGGGGAAGG 480
CAGGACAGAG CTAGTGAGAT AAACACTGTC ATGGGCCGTT TCTATCATGT ACTCACAAGA 540
GCATAATAAA GCCCTTGTAA TATACTAGAA CTTGTGTGGT CCCGGGGCCT CATTTGCATA 600
CTAATTACTG AGTGCAAATG GGACCGAGGG GTAGGGAGGA AGGGTGGGGG AGGCATGCAG 660
GGAGCGAGGG GCCTGGACTG TTTGCTCTGC CATTTCATAT CATGCTAACA AGCTAATCCG 720
GCGTGCAGTT AGCTCCTGAT ATATAACTGC TCATTAGTAT TATAATAAAG TACATGAAAC 780
AACCATAAAA CGTTATATAC TGCACAAGTG TTGTTTTCTT GCCAATTATC TGCAGGCGGA 840
TTTATCACCA CAGTTGTTTC GAATTCCCCT TGGTGAGGTT TGGGCGGAAT AAAGAAAGGT 900
GTTGGTGGCG GCGGCAGCAG AGGGGGGCCT TTTTGAGGGG CAGACCATGT GTTTTCTTAA 960
GTAGCACTTA CTGATGCGCC ATTTCATGAG AGTGAAGCTA CAGAGATCCA TCCTTCCCAT 1020
CTCCACAGTC TAGCAGCTCC AGAGAAAGGA GGAGAGAGAG AGCTGAGGCT TGCAGGCCCA 1080
TGGCTTTTGG GGTGACTCAG AACCCCCGGG TGCAGAGTCT GTGTCTATTT AGTGGGGTCT 1140
TACAGAGCCA CATGGAAGGT GCCTGCCTGT TCAGGAGCAG AGCTCAGAAT AGCTTTACTC 1200
CTGCAGCTTT CTCCCTATAG TGCGCCCATG GTGATCTCTA CCCCGGGCTC TGGTGTCTCC 1260
ACCCAAGGCT TCCTGGAGAT CAGCAGGTCC TTGGAGACTC CTGTTTGACC TCTGTAGTCT 1320
CAGGGCCATC CAGACACACC CAGCAAGTGA GAGATCTGAC TTTACCTCCC TGGCTAATAT 1380
AAGACAGGCC TTCCCTGGGC TTTCCTGGGA TAGGAAAAGG CTTCGGGGCC CCCGCTGTGC 1440
ATCATGGCTG GGTCTCACTG CAACTGCGCA AAGCAGGACT TGTGCATGGT GTGTCACAAC 1500
CTCATGGGAA GGACTCATGC ACAAGGAAAA CCACTAGTTC CCACAGCCTG TCAGGAATCG 1560
GTTGTGGGAC CCAAGAAGCC AGTTCTTCAA AGGCTGCTCC TGATTGGAAG TCTCACCCAG 1620
GCCCTGTACA GCCGGCCTTC CTCATCTGCA AGGGACCCTC ACCTTTGGTA AGTGGTGGAT 1680
CTTACTAGGA GCTGAATGGA CACAGTCAGT GACACAAGGC TTTGTGCTGT GTCAGGGATA 1740
GGAGTGGGGA TCAGAAAACA GGCTAACCTT AAGGGCTGAG GATCAACCTC TGAGAGTCAT 1800
CTGCCTCTTA GTGAGCCAGG ATAGATCTCC TTATTCACAA GTGACAGCCA 1850