EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-15965

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:115540920-115542880

Target genes

Number: 19
Name	Ensembl ID

Gm12839	ENSMUSG00000083457
4732418C07Rik	ENSMUSG00000034210
4930544O15Rik	ENSMUSG00000044556
Atpaf1	ENSMUSG00000028710
Gm12847	ENSMUSG00000085249
Mob3c	ENSMUSG00000028709
Mknk1	ENSMUSG00000028708
Kncn	ENSMUSG00000073774
6430628N08Rik	ENSMUSG00000034185
Dmbx1	ENSMUSG00000028707
Faah	ENSMUSG00000034171
Nsun4	ENSMUSG00000028706
Gm12854	ENSMUSG00000078238
Uqcrh	ENSMUSG00000063882
Lrrc41	ENSMUSG00000028703
Rad54l	ENSMUSG00000028702
Pomgnt1	ENSMUSG00000028700
1520402A15Rik	ENSMUSG00000028701
Pik3r3	ENSMUSG00000028698

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

INSM1	MA0155.1	chr4:115542605-115542617	TGTCAGGGGGCA	+	6.92
NFAT5	MA0606.1	chr4:115541805-115541815	AATGGAAAAT	-	6.02
NFATC1	MA0624.1	chr4:115541805-115541815	AATGGAAAAT	-	6.02
NFATC3	MA0625.1	chr4:115541805-115541815	AATGGAAAAT	-	6.02

Enhancer Sequence

ATCCTTCCTG GTTTGGGCGG AAAAATGGAG GTAGAGCGAA TAATTGGTTA GCTCTACTTC 60
CCACACAGCT GTGAGTGCTC AGAGCCAGCT GTAAGCATGC TGTACATGGA TCCCACTCTG 120
TGTCAGACAT CGAGCATAGC CAGGTGTGGC AGGTGAACAG CAGGTCAGGT TCATTGATTC 180
CTCCTGGGTC CTCGATGGCT GGAAGTGATC TGCAAACTTC TAGTGTCCAT GCTGAGGCCC 240
TGACTCTGCG CCTGAGCTGA GACTCCCTGG AAGGGTATCT GAGCATTGCA CAGCATGATG 300
AATGGAAGTG GTTCTGTCTC TGAAAGCTGG GGTGCATGCA GGGAACACCT GCCTGACAGA 360
GATTTACAAC TGCTCCCCAA GCTGCCTCTG CAGATTGCAA AACTGGGTCA TGCTTTGAAC 420
AGGAGCCATA CCTTGGAGGA GGGGTAAAGG CAGTTTTATT TTTTATTTAT TTATTTACAA 480
AAATGCACTA AAGGGACCAG AGGCCAATGG TGTCTTAGAA GTTGTGAAGT GCTTGTTACC 540
ATCTAGCTGG CCCGTGCCCA TGTGACTAGA AGTTGGAGAG GATGAAAAAC GATTTCCAGG 600
TGAACTTGGC TGTTTTCTAA ATAACTTCAT GCCGGGAAGA TGAATTGGGC AAGAATGGGT 660
CAGCCTCAAA ACAAGTTCCC TACTTTTAAA TACTGGACAC ACTGCGGCTT AACCTCTGGG 720
AAATGAACCA GAGCCGCTCG ATGGCTAGAG CACTCACTCA GGCAGCCCCT TTATTACAGC 780
CCGGCTCCCC GAGTTCTCGG GCCGAGGCAC AGATGGGCCA CGGCACCTAT TTGGAGAGTA 840
AGGCTCTGTG TGCAGCTTGT GATCTTCTGT GGGAGCACTT GCCATAATGG AAAATATCCT 900
TCACTTTTAG TGCGGTGAGC AGTAGCCTGA CTCAATTTGT GCAGGCCGGG CTGAGTTGCT 960
CTGGGTTCTC ATTCAATTAG GTGACTGATG AAGTTACTTA GCTTGCTGGA GCTCAGCTGT 1020
TTCTTCTCCA GTGAAGTAAC TTCAGAAGGC TGGGCCTGTT AATAGAGAAT TGAGGGCTGC 1080
CTGCGAAGCT GATCCCGGGA GTTTGAATGT GGCATGTTCA CTTTCCCCAT CATCACTCTG 1140
TATCTTCAGC TGCTTCCCAG GCCTTCGAAG CAGCATGTTC AATCTTTAGG CAGTGCTGTG 1200
TGTGCTGTCG AGGGATGGAG GTAGAATTCC GTGTTCTCTG CCAGAACACC ATGGCCTCCT 1260
TTGTTAGCTC TATCCCTTCC TATGGGTGAA ATTTTAATTT CCCGTGAAAA TTTAACACCT 1320
TCACAGGTCT GCTTCTATCT GCAGGCCTCT GTAGGAGGTG TGGCCCAAAC ACTGGGGTGT 1380
CTCCTCTGAA GAGCTGTGTG CTCACTCGAT CAAAGCTTTG CTGCAGGCGG GGCGGCCAAG 1440
CATGCACATG GGGTGCGGAG CAAGTGAGAG GGAGAACCGA GAAGCCTTGG GAGAATTGCA 1500
GAGTTAACAC TTGGTCCTCA GAACACTCCA GGAGTCACAC TGAAGGACTC TTCTTCTAAA 1560
ATCAGTTACA CAAGAAGAAA TGAGGGAGAG CCATCCTGGT CCCAAGATGC TCTCAAACAA 1620
GGCACTCATT ATTTCTGCAT GGCTGTCCCA GCCTTGCCAT TTGCAGGGCT GTCTGCCTAG 1680
CTTTATGTCA GGGGGCACAG TAAGAATTCT CGGTTGTCTC TGCGGTGCGG AAAGTAGGCG 1740
GCCCAGGATT CATTCAGCGC TTCTTATCCC TGCCAGACTT CTAAAGCCTC TACTTCAAAA 1800
GAACTTTGCA GAATCAACCC TGCTCTCGGT TTGTGTCTCT GGTTACCGCT GCCTCCTGCA 1860
GCTCGTTGAT TTTTTAATGT ACCATAATTG GGAATTAATC TGCGAACAGC AGCATTTGGA 1920
AAAAATTAAT TGTGTGTGGA ATGTTTGATA ATTATGTGCA 1960