EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-15344

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:43570340-43572230

Target genes

Number: 23
Name	Ensembl ID

Rusc2	ENSMUSG00000035969
Tesk1	ENSMUSG00000028458
Cd72	ENSMUSG00000028459
Ccdc107	ENSMUSG00000028461
RNase	ENSMUSG00000088088
E130306D19Rik	ENSMUSG00000051517
Car9	ENSMUSG00000028463
Gm12454	ENSMUSG00000087142
Tpm2	ENSMUSG00000028464
Creb3	ENSMUSG00000028466
Tln1	ENSMUSG00000028465
Rgp1	ENSMUSG00000028468
Gba2	ENSMUSG00000028467
Msmp	ENSMUSG00000078719
AL732626.1	ENSMUSG00000092675
Npr2	ENSMUSG00000028469
Gm12473	ENSMUSG00000086043
Spag8	ENSMUSG00000066196
Hint2	ENSMUSG00000028470
Gm12481	ENSMUSG00000043770
Tmem8b	ENSMUSG00000078716
4930412F15Rik	ENSMUSG00000043633
Clta	ENSMUSG00000028478

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2

MA0516.2

chr4:43571648-43571665

GAGGGGGAGGGGCTTGT

6.64

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_05055	chr4:43570270-43576815	E14.5_Heart
mSE_09686	chr4:43570100-43576168	MEF
mSE_11390	chr4:43570313-43577415	Placenta

Enhancer Sequence

AGACAAGCAA GACCAACAGT GCAGACACTG AGACTCAGGC CTTACTGCAG TCTCTTGCAC 60
TCTTCATCAT GCATGGCCTC CCCAGATTGC CCCCACCTTA ACTAGGTTCC AGATGGTGCT 120
TTCAGCGTAG CTCGGCATTT GCAAAGCCAA GCCCATTTCC CCAACCTTTC AGACACCATG 180
AGCAGCTGGT GGTACACAGG CCCAAGACAA CAGGTCTGCC CAGCAGCTGA TGATGTGACC 240
CAGTGTGGTA CTGGACTAGG TGCCTCTTAA CTAAAAAGAG AGGGATGCAG CCCCCACCCC 300
CTTCCCTACC TGACAACTGG CTACTCCAAG GGGGTAAGCA GGACCCAGGG GAAAAACCAG 360
GGAACAGGCA GGCATCACAA TACAAAAGGC ATTTGAGAAC CAGGGAAATT AGGAAGGGGC 420
AGAGGAAAAA GGGATTGGGA AAGGTGGATC AATGACCAGG AGGAAATTTC TGGCCATACA 480
CACAGTTCAG GATTACAGAG AAAAGCAGCA TGGCTTGTTC TCCATTTTTA CCCCAAATGA 540
GAGGACCTCC CGGCCCCCTC AGTCCCAGCT CTCTCCCTTC CTTCCCCCTA GGGAACCTTC 600
CCAGCAGTGG ACAGACCTGG CTGTGGAGTG AGGGCTGGTC AGAGAAGCAC CAGTCCACGG 660
AACCAGAGCA GTACTGAAGG ACTCCAGCCT CAGCTGAAAC TGCATGTGTG CCCCTCCGCC 720
CCCATTTCCT CCGGACATAT GGATACCCAC TTCTTCCTCT GGTAAGATCC TGATAAGAGA 780
GTTGAGTCAT GCCTGCCCTC CTCCAGGCTG AGTAGCTATC TACACAATTA ATTGAGAGTG 840
AAGGAACTGG ACACTGAGTC GGGACTAGCA GTGGCAAAGA ACAAGAGCCC AGGAACTAGG 900
AGCAGAAGCT ACCTGCTTCG TGTCTTGCTC TGAGAACTCT GTCCCCTTTT ATCAGGCTTT 960
ATGAAGAGCA ACAACACCCA CTCCATGTCC CCTTCCCAGA GAACTCCTCC TCCCTCAATA 1020
CATTCCTGAG ATGCATTCCA AAGGCCTTGG GCAATTGGAG GGGGGGTGTG GAGGACAGGA 1080
GGTCAAATCC CAGCAAGGAA TGGAATGCAA GTATACTAGG GCTAAGGAAT TTTGGGGTAC 1140
ATGGAGAATA TCATCAGTGC AGGTACCTAC AGGGGCGAAC TACAGAGACA GGGAGTTAAA 1200
AGGGACAAAG GGAGAAAGAA AGCTGAAGAC AGAGTCAGAA TGTAAGAGGG TTGGGGGAAT 1260
AACATGCAGT CTGTTACCAA ATTTGGCCTC TGAGTCCTCA ACCGCTGGGA GGGGGAGGGG 1320
CTTGTGGGTG AGACTGACAT ATCCGGCCTT GGGCTGCTGG AAGCTCCTTT CAGGCTGGAC 1380
CGGGCAGCTG AGAGGCTGGA TCTGACCTCC TCCAGCACAA GGTCTGTCTT CACAGTCATA 1440
CATGTATTCT CACTCTTCAC CAAGGCCCCT TAGCTTACAC ACAGGACTCC CTCCCGCCAA 1500
ACTGCCTGTG CTGTTGCTAT ACGGATCTAT CTGTTGTAGG CAGCACGTGT GCACACAGCT 1560
TCCCCACAGT GCACCAGCCC CAGTGCCGGC TCCCAGCCTC TCTCCTTCAC TGTATGCTTT 1620
TCCCTCCATG CATTCTCTAA GGCCCATGGT GGGAAGGCCA GGAAGCTCGA TGAGTAAGAC 1680
TAGACCTTGC TTTCCGCAGG CTGCCAGCCT CCCAGGGGTG GGGAAAAGCT AAATGCAGAG 1740
TTACAACAGA GGCAGGCTGT GGAAGGAGCC AAACGTGTTC ACCCAGAAAA GGGAGCCCCG 1800
GAGGCTAGGG AAAGGGAGCG AAGGATCCAA GGAAGCTATC ATCTGAAGTT AGAATTTTAA 1860
AAATATGAAG ATAATAAGAA GTTACAGCGA 1890