EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-15281

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr4:33334220-33334920

Target genes

Number: 8
Name	Ensembl ID

Lyrm2	ENSMUSG00000045854
Rragd	ENSMUSG00000028278
Ube2j1	ENSMUSG00000028277
Pm20d2	ENSMUSG00000054659
Srsf12	ENSMUSG00000054679
Pnrc1	ENSMUSG00000040128
Gm11934	ENSMUSG00000086127
Rngtt	ENSMUSG00000028274

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr4:33334900-33334911	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr4:33334900-33334910	GCCCCGCCCC	+	6.02

Enhancer Sequence

ACATCTTGAT CAAGTACAAT TTCAGTACAA TGGCTGCTTT TCGTGTCACT ACCAACAAAG 60
AATTCTTCAA GCTGTATGAA AAAGGTGGTT TCGGCTTTTG TTTTTCATGC TAAGACAACT 120
CTCAAATCCT TTAGCCTCGA CAAAACTGTA TCCCAGTTAT CCAGATCCGT TAACCGAGGA 180
GTCCATTTTA TAACTTCTAA AAACTCATTC AGGGCGCTGC TTAGAAGCCC CCTCCAGCGA 240
GGCAAGCTCG TGCCGGCCTG CACAGGGCCC GGGACACCTT CGCGTCGGGC ATCAGACGGA 300
GACTCCTGCC AACTTCCCAA CAGCAGTCCG ACTCAGCGGA TCTGGCTGTG CGTGGGTCCC 360
GCCCGCCCGG TGCCCCACTG GGCACCGCGC CTGCGCCTGC GCCTCCGCCC CCACCCAGCA 420
CCGCCTTCAT GAGCGCCCCA GAGCGCTGCA CGTAGCGGGC TGACGTCAGC CCTCCGCAGG 480
TCCCTGAGCC CCGAACGCCG AAACCCCCTG GAGCGCCGCC AAGCTTCTAA ATGCAGGCTG 540
TTGCTGGGCC GTAGCCGCCG CTCCCATTGG CTGGCTCCGG AGCCAATGGG CGGCGCCAGC 600
GCAGCCGCCC AGCCCCCCTC CCGCTTCCGC CCCACCACTC GAGCGAGCGT CACGGAAACT 660
TCCCTCCCGA GTAAACAGCC GCCCCGCCCC CACCGGCCCT 700