EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-15090

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr3:152331100-152331710

Target genes

Number: 6
Name	Ensembl ID

Dnajb4	ENSMUSG00000028035
Fubp1	ENSMUSG00000028034
Fam73a	ENSMUSG00000054942
Usp33	ENSMUSG00000025437
Zzz3	ENSMUSG00000039068
Pigk	ENSMUSG00000039047

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr3:152331372-152331392	ACACCAGACACCCCCCCACA	+	6.38
ZNF740	MA0753.2	chr3:152331433-152331446	CTCCCCCCCCCAC	+	6.52

Enhancer Sequence

GCTCTGCGCG CTCGGCCCGC GCCTCCGGAG CTCGCTGCGG CGGCCGCCAG TCACGCTGCG 60
CGGGCGGGCG CGGGGCGCGG GGGTGGGGAC GCGCGGGCTG CAGTCACTCC CCAGCCCGCA 120
ACGCAGCCAG GGCAGCCAGG GCACCAAGGA GCCAAGAACC GGGCGATTGG AGCTGGATAC 180
AGTTTTGCTT CTACACACAC ACACACACAC ACAAACACAC ACACACACAC ACACACACAC 240
ACACACACAC CAGACACACA CACCAGACAC ACACACCAGA CACCCCCCCA CACACACACT 300
ATACAGACAC ACCATACACA CTATAGACAG ACACTCCCCC CCCCACAAAC TTACCACAGA 360
CAGACACTCC CACACACACC ACAGACGATA GACAGACAGA CAGACACCAC TTATCATGAG 420
CTCCTCCAGG AGCTCTTCCA GGGGGGAAAA ACCCAAGTCA GAGAATTCAT ATATTCTTAA 480
GTTAATGGCC TTTCAGTGAT AGGGAGTTGG AAGTAGGGAA AGAGGAAGGA TTCTGTTGGG 540
TCTTTTAACA CTGGAGTACC CAGCCCTTAA GAAAAGTTGG AGCAACTTAA ACATTTGAGT 600
AGAAGGCCTG 610