EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-14788

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr3:108029110-108029280

Target genes

Number: 30
Name	Ensembl ID

Ahcyl1	ENSMUSG00000027893
Csf1	ENSMUSG00000014599
Gstm5	ENSMUSG00000004032
4933431E20Rik	ENSMUSG00000086968
Gstm7	ENSMUSG00000004035
Gstm6	ENSMUSG00000068762
Gstm2	ENSMUSG00000040562
Gstm1	ENSMUSG00000058135
Gstm4	ENSMUSG00000027890
Gm12500	ENSMUSG00000056411
Ampd2	ENSMUSG00000027889
Gnat2	ENSMUSG00000009108
Gnai3	ENSMUSG00000000001
Gpr61	ENSMUSG00000046793
Amigo1	ENSMUSG00000050947
Cyb561d1	ENSMUSG00000048796
Atxn7l2	ENSMUSG00000048997
Gm12501	ENSMUSG00000083462
Psma5	ENSMUSG00000068749
1700010K24Rik	ENSMUSG00000085102
Sort1	ENSMUSG00000068747
Gm12523	ENSMUSG00000084863
Gm12522	ENSMUSG00000074281
Psrc1	ENSMUSG00000068744
Celsr2	ENSMUSG00000068740
Sars	ENSMUSG00000068739
Scarna2	ENSMUSG00000088185
Tmem167b	ENSMUSG00000068732
Taf13	ENSMUSG00000048100
Clcc1	ENSMUSG00000027884

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR1	MA0162.3	chr3:108029186-108029200	ATTGCGGGGGCGGG	-	6.22
EGR3	MA0732.1	chr3:108029186-108029201	ATTGCGGGGGCGGGA	-	6.44
EGR4	MA0733.1	chr3:108029185-108029201	CATTGCGGGGGCGGGA	-	6.34

Enhancer Sequence

TCCACCTGCG GAGACAAAGC CAGCAGACGG TCAAGGCGGG CCGGCCCGGA GGGAAAGCGT 60
GGGGCTTTCT ATTCACATTG CGGGGGCGGG AGAGACGGAA TCAGACACAT TCGGGACATC 120
TAGGTAGACA GGGACTAGCG AGAGTCCACA GGCCGGGTAC TCGGGGCTTA 170