EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-14475

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr3:87598520-87598850

Target genes

Number: 20
Name	Ensembl ID

Arhgef11	ENSMUSG00000041977
4933430H15Rik	ENSMUSG00000023084
Ntrk1	ENSMUSG00000028072
Insrr	ENSMUSG00000005640
Pear1	ENSMUSG00000028073
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Isg20l2	ENSMUSG00000048039
Rrnad1	ENSMUSG00000004896
Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Iqgap3	ENSMUSG00000028068
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Smg5	ENSMUSG00000001415
Lamtor2	ENSMUSG00000028062
Ubqln4	ENSMUSG00000008604

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr3:87598611-87598631

CCCCAAACCAGCACCACAGT

6.33

Enhancer Sequence

GAACTTGGGC TCTTGATTGA ACCCCACAAA AAGGTTCTTA TCCTAGATCG CTGGACCAAT 60
GCCTAATCCA CCTAGTTTCG GTCTTGCTCT ACCCCAAACC AGCACCACAG TTAGCTACCC 120
TTAATCCTGA GCGACATCCA GACAGTGACT GCGCGGCTCT GCCAGGGTGG TGGCAGCGGG 180
AGAAGCCGCC GCAGCACAGC CAAAGGCTAC ACGTGCCAGT CTCCTACAGC AGCCAAGCCT 240
GACCCCTCAA GCCAGAGGTG AATGAGTGCG CGCCCTCGGG GAAGGGCTGT GCCCTCCTGA 300
CCCCGCACCC CTCCCCCGAA CGACACACAC 330