EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-14474

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr3:87564720-87566130

Target genes

Number: 18
Name	Ensembl ID

Arhgef11	ENSMUSG00000041977
4933430H15Rik	ENSMUSG00000023084
Ntrk1	ENSMUSG00000028072
Insrr	ENSMUSG00000005640
Pear1	ENSMUSG00000028073
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Isg20l2	ENSMUSG00000048039
Rrnad1	ENSMUSG00000004896
Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Iqgap3	ENSMUSG00000028068
Cct3	ENSMUSG00000001416
0610031J06Rik	ENSMUSG00000001418
Smg5	ENSMUSG00000001415

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr3:87565124-87565144

CACCAACACACACACACACA

6.14

Enhancer Sequence

CTCCCCCAGA ACAGTGCTCC AGCTCTCCCA GAACAGTGCT CCAGCTCCCC CAGAACAGTG 60
CTCCAGCTCC CCCAGAACAG TGTTCCAGCT CCCCCAGAAC AGTGCTCCAG CTCTCCCAGA 120
ACAGTGCTCC AGCTCCCCCA GAACAATGCT CCAGCTCCCC CAGAACAGTG TTCCAGCTCC 180
CCCAGAACAG TGCTCCAGCT CTCCCAGAAC AGTGCTCCAG CTCCCCCAGA ACAGTGCTCC 240
AGCTCCCCCA GAACAGTGCT CCTAGCGTTC TTCCATGGCT CCAGGTCTCA GCTCAGTTTG 300
CTAACACACT GACCCCAGCT CTCATTATTC CTAGAGTTCT GTGCCTCAGG CCTGGCTTGA 360
GTGCCACCTT CCTTTTCTGT CTGCTCCCTG ACAACTCCAT CTCCCACCAA CACACACACA 420
CACACACACA CACACACACA CACACACACA CACACACTGG CACCACATTC ATCTCTCTTA 480
CAAGTCTCCT AACACTACAT ATCCACTTCT CTTGTCCCCT GAACACCCCC TAGCCTAACA 540
AACAGCAGGA CACCACAGTG CAAAAGCTGG GACCAATGAA GGAGGTTCTC AGGGAAGCCA 600
GCGTGGGCTC GGTCCAGAAC TTTCCGATGG ACAGTTCAGT ATCAGATGCC ACTGAGAGCA 660
AGCTTCCATT GCTGTATGTA GGCAGACAAG AGCCAAAGCT ACTGCTGAAG CACAGGAGGT 720
TACTGCCGTG GGGGACTGCA TGCGTGAGGC CACAGCTAGG TGACCACACA GCCACTGGTG 780
CGCGCCAAGG GGGCAATGTC CACGTTTTTC TCACAGTGCT AGGAAACTGG CCCCTCACCA 840
GCTCCACACC TCGGCCTCAC CCAGAGGGTG GGGAGAGAGT GAGTCAGGGC CCTGGATGGG 900
ATGAGTTTTC CTCTGAACGC CAAGGCTCAG GAAAGGTTGA GGGCTAGAGG CCACCCCTCT 960
GCCGCTGGGT TCCTGTTTTC TGCTTGGAGT TTCTTAAACT TGCCCGGGCT CCGGGCTCGG 1020
CTCTCCAGAG ATGCCCACAT CTGCTTATAA TTTCTCCGAG AGGTCGCAGT TGCTGGCCCC 1080
TTACACCCCT GAGTATCTCT GGAATGCTTG CTGCAGCCCC ACCCCGGCCC CCCACCCACC 1140
CACTTATTCT GGCAGATTGT GACTCTCTCA GCTCAGATAG CGTGCCTCCT TCTCAGATTA 1200
ACACAGACTC CCTAACTGAA CCCCAACTCC CTGCTGTGGT CCAGCCCCAC CTTTCACCCC 1260
AACACTTTTC CCTTGGTCCT CCTTATTCTA TGTCACTGCC TCCCAGAGTG GACCTCTCCC 1320
CAACTCACTC ACCGACCAGA GCCACTGCAC CCCCCAGGAC CTCCCCACCC CCCTGCTGAC 1380
TCTAGGCTTC TCTCACTCAA CCAAGTGACT 1410