EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13931

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:178462350-178464030

Target genes

Number: 3
Name	Ensembl ID

Ppp1r3d	ENSMUSG00000049999
9030418K01Rik	ENSMUSG00000070476
Cdh26	ENSMUSG00000039155

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LEF1	MA0768.1	chr2:178463404-178463419	AGAGATCAAAGGCTC	+	6.27
TCF7L2	MA0523.1	chr2:178463404-178463418	AGAGATCAAAGGCT	+	6.17
Tcf7	MA0769.1	chr2:178463404-178463416	AGAGATCAAAGG	+	6.44

Enhancer Sequence

AGAAACATGT TTTCCCAGTA AACAATACAA TGTCTGTGTT CACAATGTGA TCAACTATCC 60
TGCAACAAGG TTGCTACTAG GTACGAGGGC AGGTGTGGCA CAGGAGGCGG GGTGAGGGAT 120
GATGGCTGGA GACAGAGAGA GCTCATGTCC TTAGGGGCAA ATGGTGAGAC AGCTCAATGG 180
AAGCCCAGGT TAAGGGTGCC AGTGTCTATG GAACAAGTAA ATAATCCTTG GGACAGAGCT 240
CAAACAACCC CGGGGGTCTG GCTGCCCTTG AAGCTGGGAA GCTTGGCATA GGCCTTCAGC 300
AGCCCCTGGA TCTGGATGGG TGGCTGGTGC TCCAGAGTCC TTGCTGTGCG TTTGTTTACA 360
GAGGCAAAGC AACAGAGGCT CAGGTTTGCA AAGGGGTGAG TTGCATAGCA GTGAAGCTTG 420
CTGAGACCTC CTCCTCCCAC CATCTCCTGT AGCCCTCAGG ATGTCTCCTC CCACCCTGCT 480
GTGCTGTGCT GGAGGAGGGC AGTGTGGTTT ATTAATCTCA CGGGCCCTGA GCCCTATTCC 540
CTATGCGCCT GCCCCATATG GACGCAGAGA CCTGTGCAGT GCATCCTAGC AACAGGAACA 600
CGGGGCTGCA AATCCCAAGG AAGCAATTCT TACTTAAGGA TGTTAAACTG GGGTTGTGTC 660
CGTCCAATGG CTCAAACTGA GGCCTTCTGA CCCAAAAGGC TAGACTGTTG GAGGTCAAGT 720
TTTTGGATTT GTTGCTGCTT TAAGAAAATC TATTAAAAGT AAAACATGAA AACTCAACAG 780
ATTCTTTCCC CCCTCTGCCC TTATTTTCCT GGCAAATTAT TATTCAAGAG ACGAAGTACC 840
CCATGCTGAA AAAAAAAGAT AGTTAAATAT TCCCTCTATA GTGAGGGGGA AAAGTAATGA 900
GCCTCGGTGT AGTTCACTGC CCCGTGTGGT GCAGGCAGCC TCAAATGCAT TCACGGGGAA 960
TGGTGCGGGC GGGAGCTCTG AGCTCTGTGT TAATCCTTCC GGTGCTGGTT AAACCTAGGC 1020
GTGGGGGTTG GGGGGAGCAT GATCTGAGCC CAGCAGAGAT CAAAGGCTCA AGCCTGGAGC 1080
TTTCTGCTGA CTTTTTTGGT GTCTCCTACC ATCTCCGGCT CGAGAATCAT TTCAGAGCCA 1140
CTCCGAAGCT CGCAGATGAT GTCTTTATCA GGCTTCTGTG TGTATTTATT TATTCAACAT 1200
CTGAAAATGG AGACAAGCCT GCCCACCAGA CAAGATTAAT GACACACCCG ATGGGAACGA 1260
GTTACTCAGA GGCTGAGACC CAGTCCCCAC CCTGTACCCT GGGCTGAGCC TGCAGGCTTT 1320
ATTAAGGAAA ACACAGGGAA GGGGAATTCT GCAGTGAGCT GTTTAGAATC TAAACTTGGG 1380
AGCACGGTGT CCGTGGCGGT TCTCTGTGCT ACCTGGGCAC ATTTATTAGT GCCCCAATTG 1440
TCAAGGTCCC CGTTTGTCAG ATGGGGGATT GTCTAAGCTG TCACACGGAG ATACAGGGTT 1500
TGTGTTTCAC CCATGAGGGA TGCCTACTGT CACATTCGAG TCTCCTTATC ATTGAGACAT 1560
GTGCTCAACA CACAGGGTTA AAGCCTGCTC TACCCTCATG CATGGACTCC AACTGTCTCC 1620
CTAGTGGTAT GTGAGAACCC TGAAGGCTGA GTAAGATGCC TGTAGCCAAC CCACACCACT 1680