EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13713

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:167064070-167065840

Target genes

Number: 19
Name	Ensembl ID

Trp53rk	ENSMUSG00000042854
Cse1l	ENSMUSG00000002718
Gm17096	ENSMUSG00000090397
Stau1	ENSMUSG00000039536
Ddx27	ENSMUSG00000017999
1500012F01Rik	ENSMUSG00000074578
Znfx1	ENSMUSG00000039501
Kcnb1	ENSMUSG00000050556
Ptgis	ENSMUSG00000017969
B4galt5	ENSMUSG00000017929
Rnf114	ENSMUSG00000006418
Spata2	ENSMUSG00000047030
Snai1	ENSMUSG00000042821
Gm11476	ENSMUSG00000085596
Ube2v1	ENSMUSG00000078923
Gm20431	ENSMUSG00000089739
Cebpb	ENSMUSG00000056501
Tmem189	ENSMUSG00000090213
Ptpn1	ENSMUSG00000027540

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:167065266-167065278	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr2:167065270-167065282	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr2:167065274-167065286	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr2:167065278-167065290	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

TCAGCCCAAA CCTTGCTGCT GGGAGGTGTT CACCCTTCAC TGCCATCATC ATCACCACTA 60
CCATCATCAT CACCATTGTC ATCACCATCA TCTCATCTCT TTAGACGCTG AGAACTGGGA 120
CAGAGGACAC TAACTTGCCC CACAGGCAGG GAGGGACCGT CCCTGCTGAG AGAACAGCCA 180
GAGGCCCTGC CTCACACGGT CCATCCTCTT CCTTGCTGCT GTACCTGCCC CAGGGTGTCG 240
CACAGGCTAC AGACCCCAGC AGACAACAAA AAGCACCATG TGTGGAACAC AAAAAACTAT 300
TCAAGTAGGG CCGGCAAGAT GGCTCCGCGG GTAAAGGTGT CTGCCACCAA CCTGATGACC 360
TGAATTGGAT CCTCAGGACC CACATGGTGA GAACTGACAC CTGTAAGTCA TCCTCTGACA 420
TGGGTACCAC GTGCACATGG GTACCACGGT GCACACACAT CCATACACAC ACTAAAACAA 480
ATATATAGAA CGCGTTTTAA AAAGAATGCT CTCACAACAA CCAGAAAGCC CACGGGCAAA 540
AACACGGGCA GAATGGATAA AGATAAAGCC CACGAACACC TGCCCAGAAG TGGAAACAGA 600
TGTCACCTCT AACATCTGGT GTGAGAAAGG AAATGCTGGA AGCCGAAAAC ACAGATCTGG 660
TGCGGAGAGA GCCCACAGCT AAAGACACCC AGCTATTCCT AACAGGAACG GCTCTTGAAT 720
TTTCGTTCCC TCCTTTTGGG GCCGATAAGC GAATATATGG TTTTAACTTT CACCTGGAAG 780
CGAGCCTGGG GTGAGCTCAG CTCACACATT GTTTAAAAAC TCAAGTCTCG GGGGTTTCTG 840
GGCTTTTCAG GCGCTCTAAT GTAAACACGC AGCAGAGCTG CCCCCATCAT CCGAGCTGGA 900
GTCCAAGGAG GAGAGCAACT CTCGAAACAT CTGGGGATGT GGGGTTGGAC AAGCCCAGGC 960
CCTGGAAGCT GACTGCGGAG ACTGATGGAC ATTCCAGAGT CTGAAATTCA GCTACTAGGC 1020
AGGGACCAGG GCTGGCTTCT AAATGGGACA AACACCCTAA AAGAATATAG GATGCAAGCC 1080
TCCGGAGGGG TAGCAGGAGG GAAGGCGATA ACATTTGCCA CTTCTCTGAA ACTCTCAAAC 1140
TAGTCTGCAG TAGTGAATAT GTGTCTGGAG GGGGAAGACT AGTTTTTGTT TGTTTTGTTT 1200
GTTTGTTTGT TTGTTTGTTT TTTAAATCTG GAAAGTTCTG CCCAAATCGA GCAACAGGAA 1260
AGGCCTGGGG AAGGGAGAAG GAGAGTCAGG GTGGGAAGGG ACTTGCTTGG TTTAAATCAA 1320
ATGTATTCTG ATTCTGTGCT ATTCAAACTA ATTTTTAAAT GCCTTACACA AAGACCTACT 1380
GCCAGACGGA CTCCCTGGGA TGAAGAGAAG TTTTTGGTTT TTCTCCTAAA TGGCAGAGTT 1440
GCCACAAAGC ACTACACTTT TAAAGGACCA AGGATCTGTT TCGACTCTAC CCAAATTTCT 1500
ACGCTGGCAG GTATGTCCTG GATCCCATAT TAGACCCTCA TCCATGAGTG GGAATTCCTC 1560
GATCAGTGTG ACCGTGGCCA GGCATCGCGG CCAGTCCCCA GCCTCAGCGT TCCCACCCGG 1620
GATGGAGCCA CAGAAAGTCT AGGAGTCCAG GGCGTGGGAC ACCGTGCAGG CTACAGAGTG 1680
GGTAGTACCA ACACTGTCCG GGTCCCACGC CGCCGACCCT GAATTTCACC TGGCGTCCTT 1740
TCCGCACCCT GACGGGTCAC GGGGAATACT 1770