EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13498

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:157312980-157314070

Target genes

Number: 18
Name	Ensembl ID

Gm14230	ENSMUSG00000087179
Ndrg3	ENSMUSG00000027634
Dsn1	ENSMUSG00000027635
Samhd1	ENSMUSG00000027639
Gm14277	ENSMUSG00000084113
Rbl1	ENSMUSG00000027641
Rpn2	ENSMUSG00000027642
4922505G16Rik	ENSMUSG00000074627
Manbal	ENSMUSG00000063019
Src	ENSMUSG00000027646
Gm14279	ENSMUSG00000081740
Gm14287	ENSMUSG00000082329
Gm14286	ENSMUSG00000087445
Nnat	ENSMUSG00000067786
Blcap	ENSMUSG00000067787
Ctnnbl1	ENSMUSG00000027649
Tti1	ENSMUSG00000027650
Rprd1b	ENSMUSG00000027651

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT3	MA0144.2	chr2:157313430-157313441	CTTCCCAGAAG	-	6.14
TCF3	MA0522.2	chr2:157313740-157313750	AACACCTGCT	+	6.02
ZNF263	MA0528.1	chr2:157313535-157313556	CCTCCCCTCCCTTCCCCCTCC	-	6.02
ZNF263	MA0528.1	chr2:157313527-157313548	CCCCCTCCCCTCCCCTCCCTT	-	6.38
ZNF263	MA0528.1	chr2:157313532-157313553	TCCCCTCCCCTCCCTTCCCCC	-	6.68
ZNF263	MA0528.1	chr2:157313531-157313552	CTCCCCTCCCCTCCCTTCCCC	-	7.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04405

chr2:157312607-157314276

E14.5_Brain

Enhancer Sequence

GGGTACAAGG GGTACTCTGT CTCAAGAAAA AAAACAAAAC AAAAGAAATG AACAACAACA 60
AAAAACCTCA AAGTGAATTT CCCACAGTAC TTACAAACTT CTTGATAGAA ATGGCCCCCC 120
AACTGCTTTG TATGCATGCC GTGGCTGTAT AGTCCTCAGG ACAGGATTGC AGACAGCATT 180
AGTGTCTCCA TTTTATACGG GAGGAAACCA AGGCTTAGAA GGGTTAAGTA ATGCGCCCCA 240
GTAAGGAGTG GACGTGAGAC TGAATGTAAG CCATGTGACA CCAGAAGATA TAAGATGTAC 300
AGAGAGATGC CATGTAAGGC CTCTCCTCTC ACAGTATCAA AAAACAGTCT TTATTCTGCA 360
TCTCCTGCCC AGCCCTGGGG CCCTGGACCC TCATTCTGTT CCTTCCTGCC GGGCAACTCA 420
AGAACTTGTG CTGGGCTAAC CCCCTCGGTC CTTCCCAGAA GCCCCCAAAG ACAAAAACAC 480
AAAGCCAGCT CCATCTGGTT TCTCCCACAG TTGCTTCAAA CCTGCCACTA TGCCTGTATA 540
GCAGTTTCCC CCTCCCCTCC CCTCCCTTCC CCCTCCGCTC TCATTAGCGC CTGGCCTCAC 600
CACCCACCGG GGCTGTAGAC AGAGCCCCAG TCATCCTGGA CCCCTCCAGC TCTGCCACCC 660
ACCACCCATC TGTCCCACTT GCTGGGGATT CTACCCCCTG GGATGCTCAG CGCCCCTGCT 720
TTGGCCCCAT CTCCATCCTC GCCCCTCTGC TTCTTGCTCA AACACCTGCT ACTTCCGTAA 780
GCCCCTTCGT CTGTAAACAC GAGTGACAGC ATGTTCCTCT TGAGATGTCT CGGGGATTAG 840
TCAGACATGG AGGCGCTGTA CAGCAGGGCC GGGTGCACAG TCCGTGGCTG TTGCTAGAGA 900
TTAAAGCACT AGTATTATCA ATGATTCCTT GGCCTGTGAA TGGGTGACCC CGAGGGCATG 960
TCATTCTCTC CCCAGAACTC TCACCCACCC ACCCCCTTTC TCAGAGCAGG AATCTTGATT 1020
CCTTTTGAAC ACAGGCCTTC TCTTCTCTGT AGCTGCAGGC CACGCTCTCC CATTTTTGAA 1080
AAGCACGCCT 1090