EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13493

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:157282260-157282810

Target genes

Number: 15
Name	Ensembl ID

Ndrg3	ENSMUSG00000027634
Dsn1	ENSMUSG00000027635
Gm14277	ENSMUSG00000084113
Rbl1	ENSMUSG00000027641
Rpn2	ENSMUSG00000027642
4922505G16Rik	ENSMUSG00000074627
Manbal	ENSMUSG00000063019
Src	ENSMUSG00000027646
Gm14279	ENSMUSG00000081740
Gm14287	ENSMUSG00000082329
Nnat	ENSMUSG00000067786
Blcap	ENSMUSG00000067787
Ctnnbl1	ENSMUSG00000027649
Tti1	ENSMUSG00000027650
Rprd1b	ENSMUSG00000027651

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX2

MA0783.1

chr2:157282671-157282683

TGACAGGTGTAA

6.14

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_02597	chr2:157235771-157283096	HFSCs
mSE_04405	chr2:157282502-157284044	E14.5_Brain
mSE_11236	chr2:157282055-157283843	Placenta

Enhancer Sequence

GGGTCCTGGG GATTGAACTG AGGTCAGCAG TGTCTGTGAC AGGTGCCTTT ACCTGTGTAG 60
CCATCTGCCT GACCCAGGAA GTAACTTTGA GCTGACAGCT GAAGGAAACT GAGTTGGGAG 120
GTGAAGCTGT CAGGGAATAG TGTTTGCAAA GGTCCTGTGA CCAGGAGGCC TGGCCATCCC 180
TTCTTCAAGC CACCGTACTG TACTGCACCT TCCCCCAGTG TTAGACGACT TGTCAGGCAT 240
GGATTCATTC AGCAATCCTT AAATGAGCCC CTCCTATGTG CTGGGGACAT AGATATGACT 300
CAAGTGTCCC TGCCTAAGAA AGACTGAAAC TGACTTTGGG TCCAGCAGTC AGGACTTTGG 360
ACTGGTATGT CTTCTCTCCA TAGCTGTGTC CTAAGGTGCC AGCAATTCAT TTGACAGGTG 420
TAATGAGACG AGTCCTCCCA GGGTGGCTAG TCCCCTTCTT AGGACCTCAG TTTCCCTATC 480
CGATAAGTGG GTGGGGTGGC TTGTCTCCTC CCAGAGGCTC TCCTCTACCT CGGGGATTTC 540
TGTCGCCCCT 550