EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13480

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:156670110-156671250

Target genes

Number: 22
Name	Ensembl ID

Scand1	ENSMUSG00000046229
0610011L14Rik	ENSMUSG00000027628
Gm14168	ENSMUSG00000055494
Dlgap4	ENSMUSG00000061689
4930405A21Rik	ENSMUSG00000086638
Myl9	ENSMUSG00000067818
Gm14231	ENSMUSG00000082196
Gm14230	ENSMUSG00000087179
Tgif2	ENSMUSG00000062175
4930518I15Rik	ENSMUSG00000074629
5430405H02Rik	ENSMUSG00000085741
1110008F13Rik	ENSMUSG00000027637
Sla2	ENSMUSG00000027636
Ndrg3	ENSMUSG00000027634
Gm14276	ENSMUSG00000082163
Dsn1	ENSMUSG00000027635
9830001H06Rik	ENSMUSG00000055485
Samhd1	ENSMUSG00000027639
Gm14277	ENSMUSG00000084113
Rbl1	ENSMUSG00000027641
Rpn2	ENSMUSG00000027642
Blcap	ENSMUSG00000067787

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr2:156670294-156670305	TTGACCTTGAA	-	6.14
RREB1	MA0073.1	chr2:156670830-156670850	CCCCACCCCCACCCCACCCC	+	6.27
RREB1	MA0073.1	chr2:156670835-156670855	CCCCCACCCCACCCCCCAGC	+	6.2
RREB1	MA0073.1	chr2:156670836-156670856	CCCCACCCCACCCCCCAGCG	+	6.58
ZNF263	MA0528.1	chr2:156671071-156671092	TCCCACTTCTGTTCCTCCTTC	-	6.33
ZNF263	MA0528.1	chr2:156670626-156670647	TGAGAAGGAAGAGGAGGAGGC	+	6.54

Enhancer Sequence

GCTGCAGGTA AGAGGGGATC AGGCATCAAG TCTCCAGCTC TGTCCCCATT CCTTGTGGCC 60
TTGGCCTATC ATAACCCCTG CTGGGATAAG ATGAGAAGCC CTCTCCTGGC CCCCAGGGAA 120
AGTGAGGTCG CCGAGGCTGC ACTGGAGGCT TGGGCCCTTA GGAAGGGATG AGGAGTGGTT 180
CTAGTTGACC TTGAAGGTGA GAAGACACAG GAGCAGAGGT TCTGGGGGGC AGCCCAGAGC 240
ACTTGCTTAA AAATGAATTG AGTGAACTGA GGAGATGACC CAGGGGTTGA GAGCGCGTCC 300
TGCTCTTCCT GTGCATCCGA GTTCCGGCCT CTGCACACAG CGGGCAGCTC AGAGCCTTCT 360
GTAACCCCAG CTCCAAGGGC TTCTCGCCTC TACAAGTGCA CATATGCCCA TGGAATTTTT 420
TTTTTTTTTT TAATTTCTTG ATGTAAAAGA GAAGGTCTTT TAGCCGTCGA GCTGGAGGTA 480
GGTAGACAAG CCGGCACACG CCTGTGATCC CAGCCCTGAG AAGGAAGAGG AGGAGGCTAG 540
TTACACATTC CTCTCTGAGC CTGGTGGAAC TGTTAGGAGG AACGCATTTT AACTGGATAT 600
AAAAGGACCT TTGTGAACCA CATTGAGGGG CACACTCGAG ACGCTTGTAC TAGAAGTTGT 660
GTCTCTTTTC AGTTGTCCTG CCGACCAGCA GATGGGTTTG CTCTTTGCAT AATGCTGACA 720
CCCCACCCCC ACCCCACCCC CCAGCGCTCT GGGTCTGGGT TGGCTCTCAG CTTCCCTAGT 780
TTATGCAGTA GGCCCTTGGT CTAGGCCAGA GACCTGCTCC TGGCTGGCTG GCCTCACTGC 840
TCCTTTCGTG AGCCAGCAGG CCTCCTCTTG CTTCTCTCCT CTGGCCTGTC TACCATCTCT 900
TCAACCCACA AGCTGGCTCC TTCCTCCCGT TACCTCACCT GATCCTGCGA CTTCCGCGGC 960
TTCCCACTTC TGTTCCTCCT TCCCGGAAAA GGCACAGCAA GTGGTCAGCC TATAAAAATT 1020
CTGTGACCTC ACTCTACACC CTAGACGGCC GTAAACCCAA GTCTGTCTTG AGACGGGGTC 1080
TAGACTCAAG TTATAGGACC TGATTGTCAG CCCAACTTTT TCACAAGAGG ACTCTGGATC 1140