EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13478

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:156640010-156641780

Target genes

Number: 19
Name	Ensembl ID

Scand1	ENSMUSG00000046229
0610011L14Rik	ENSMUSG00000027628
Dlgap4	ENSMUSG00000061689
4930405A21Rik	ENSMUSG00000086638
Myl9	ENSMUSG00000067818
Gm14231	ENSMUSG00000082196
Gm14230	ENSMUSG00000087179
Tgif2	ENSMUSG00000062175
4930518I15Rik	ENSMUSG00000074629
5430405H02Rik	ENSMUSG00000085741
1110008F13Rik	ENSMUSG00000027637
Sla2	ENSMUSG00000027636
Ndrg3	ENSMUSG00000027634
Gm14276	ENSMUSG00000082163
Dsn1	ENSMUSG00000027635
9830001H06Rik	ENSMUSG00000055485
Samhd1	ENSMUSG00000027639
Rbl1	ENSMUSG00000027641
Rpn2	ENSMUSG00000027642

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr2:156641056-156641067	AAGCAATAAAA	+	6.32
ZNF263	MA0528.1	chr2:156641319-156641340	TGAGCAAGGAGAGGAGGAGGG	+	6.58
Znf423	MA0116.1	chr2:156641220-156641235	TGAACCTTGGGGGCC	-	6.01

Enhancer Sequence

TTAGTATTTT GTCACCAGCT TCTTTCGTCT GGCCTGTATT TAATCACCCA TGACACTGCA 60
CACATTTGCA GGATATTTTC TCTCCTGTAT GCACAGAACA CACCGTCTGC CCCTCGAGGG 120
GAGTAACTAC TTGGGTTGCT TACACCCTGG GGTTTCTTCT GACCAGGGCT TCTGGGAGCA 180
CTGACAGACA AATGCTTGTG TGGGCTTACG CTTTGCCATT TACTGAAAAA ACCGACACAT 240
CTGTCTATGG GGCTTCCTGC CATTCCATAC AAAAGAACCG GCTCTCTGCT GTCAGAGTGA 300
CTTACTGCAG AAGGGCATGC TTCCGTCTGA GGCACGCACA CAGTGCTCTG TAAAACATGA 360
CTGCAGTCAC TGCAGGAAGC TGTAAAATGT GACCAGTGGA GCTTTTCCCT GTAACTTTCC 420
CTGACTGTCT GCCAACGTTC AATGGGGTAT GACCTAAGCC TTCTTTTTAT TTTATCCAAA 480
TGATTTTTAA AAACAGGTCT CATGTGGCTG GGGATGTCAA ACATCTCATC TTCCTGCGCC 540
CACCTCCAAC ATTCTAAGAT TCCAAGTATG GACCACTATG CCTTGTTTGT TTGGGGAACC 600
CACTTAGGCC AGGCAAGCAC TCCACCAACT GGGCTTCATC CCGACCCCTG TATTTTCCCC 660
CTGAGTTCAC AGGAGAAGCA AATTATCTGT CAGGACAGCC TTGGGAGGAA ACAGCATTGT 720
TATTCCCACT TCCTGGCTGG GAAACTGAGC TGGGTGGGAA GGAAAGGACC CGAGGTTTAC 780
ATCCTCAGGG TCCACCAGAG CCCAGGTAAA GCCTGGGACA AAGACTTGAG GAACTGGCTC 840
CACCACTAAC CGGCTGAAAC CTTCCCCGAG CCTGAAGGAA GGCTCACTCA GCATTCAGTC 900
TGACTTCAAG GAGTCTACTC CCTCAAATAA TCCAGACGAC CAAGAAATGC CATTCTGTCA 960
CCCCACCACA GCAGACAGGC AAAGCCCCCT GCATGGGAAC TGTGCAGGAA GATGGTGTGA 1020
GCATACTTTC AAACTGACCT TTTGAAAAGC AATAAAAACA CAAAACACGA AAACCAAAAG 1080
GACCCCACGT GGGATAGCCA GAGGGATCTT TCCTACCCAC CCCACTGCTG CAACCAACCC 1140
ATGTCTTAAG TTACTCCCCT GAGTGCCCCC TTAAATTACT AAGAGCATAG CCAAGGAAGA 1200
CACTAGAGCC TGAACCTTGG GGGCCCAAAG GAACAACATT GACAAAAACC TTAAATGGTT 1260
ATTCAGGGGG CAGAGTGCAA TTTGTGTCTG TTGTAGGGCG GCAGGAGCCT GAGCAAGGAG 1320
AGGAGGAGGG GCCTGGACAA GGAGAGGGAG GGGCCCAAAT ACCTTCAGAC TAAGACTGGC 1380
TTCCCAGAGG TAGGACACCA GGATGGAGAA GGTAGAGAGA GGAGAGAACG CGCAGTTCCT 1440
GCAGAACAAA TTTCTCTCAT TCTTCTGAGG CCAGAGTTAG CAAAATGTGG TAAGAATGGG 1500
ACCTGAGAGG ACACTAGGAG CAAGCAGCCC CAAAGCCCAA TGTGACAAGG GAATGGTCTC 1560
CTGAAAAGGA GGGGGTTAGC CCACAGTACA GAAGTAAATG TGGAGAGCCA GGACAGGAGG 1620
GCACCCCTTA GGTTGGGGGA GGGAGCCTAG TAGGGCTGAG AGTGAAGGCA TTGGAGCAAG 1680
ACCTCAGTGA ACACCGCAGA GGCTGAGCAG TCAGGGCAGA CAGGAGCTTG GGCCTGAAAG 1740
CCAGTCTCCA TTTACATATT TTTTAATGTA 1770