EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13473

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:156420600-156421780

Target genes

Number: 21
Name	Ensembl ID

Uqcc	ENSMUSG00000005882
Romo1	ENSMUSG00000067847
Rbm39	ENSMUSG00000027620
Gm14253	ENSMUSG00000082321
Gm14173	ENSMUSG00000061272
Epb4.1l1	ENSMUSG00000027624
0610011L14Rik	ENSMUSG00000027628
Gm14168	ENSMUSG00000055494
Dlgap4	ENSMUSG00000061689
Gm14172	ENSMUSG00000083498
4930405A21Rik	ENSMUSG00000086638
Myl9	ENSMUSG00000067818
Gm14231	ENSMUSG00000082196
Gm14230	ENSMUSG00000087179
Tgif2	ENSMUSG00000062175
1110008F13Rik	ENSMUSG00000027637
Sla2	ENSMUSG00000027636
Ndrg3	ENSMUSG00000027634
Dsn1	ENSMUSG00000027635
Samhd1	ENSMUSG00000027639
Rbl1	ENSMUSG00000027641

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESX1	MA0644.1	chr2:156421126-156421136	ACCAATTAAC	+	6.02
NR2C2	MA0504.1	chr2:156421422-156421437	AGAGGTTAAAGGTCA	+	6.64
Nr2f6	MA0677.1	chr2:156421423-156421437	GAGGTTAAAGGTCA	+	7.47
RXRB	MA0855.1	chr2:156421423-156421437	GAGGTTAAAGGTCA	+	7.04
RXRG	MA0856.1	chr2:156421423-156421437	GAGGTTAAAGGTCA	+	7.14
Rxra	MA0512.2	chr2:156421423-156421437	GAGGTTAAAGGTCA	+	7.22

Enhancer Sequence

ATTCTTGCTA TTCTCATGTG TCTTTAATGG TTGTGATTTG TATTTTCTGA TAATTAATGA 60
CACAGAACTG TTTTTTACGT AGGTCGGCGA TGCTGACCAA TTTGATGTGT GTTTACGTCT 120
GTCCCCTCCC CTATTCCATG AATTTAAGAT TACATGGACT CCTCTGGAAA AGTAACGTGG 180
TTCCTCTTCC CATCCATGGC TCCTCCAGCT TCGCCATGGT GTGCTTCTCT GGCAATTAGA 240
AGGTCTGCCG TGAGGCATTG CCTCATTCCA GAGCTGAAAC TCCAACCGCA GCCAGTGTCG 300
AGCCACTAAC TGAACAGCTT ACGGCATCTG CAAACATTTA ACAAGAGGCT CCTGTGAATC 360
TGGATCGGGG GTGTGTGTGT CCCCAGGACA CCACTGCGTC TGGGGCAGAG TCTCTAATGA 420
AACTAATTGA TATTTCTGCA GCAAAACACG TAAATATTCA CACTAATTGG CATAAAACGG 480
CTTCCTATCC ACTGAGGTCA GATTTTTGCC CACAAATGAG TCAACCACCA ATTAACTGCA 540
AAAGAACCTT CTGTCTACAG GGGCCGTGGG TTCTTCGAGC TTCAGGAGAA GGATCGTGGG 600
CCTGCGTCAG CCACTTGTCC ACCCGGCAGA TTCAGGGTAA CTTGGAAAAT CCTGTCAGGC 660
TTCAGCAGGA AGCGGTGATA ATGATTTTTG AACTAAATGG TCTCCAAGAT CCTTTCAAGT 720
TCTAGGAATC CATAGCCAGA CTTTCAGATC CAAACATAGG AAAGAAACGA CTGTGATGCC 780
CACCTGTGAG CCCCGTACTG GGGGGGCAGA GGCATGAGTA TAAGAGGTTA AAGGTCAGCC 840
TCAGCTCTCT AGTGAGGTCA ATCTGGGGTA TGCGAGACCC TGACTTAAAA ACAAAACAAG 900
TTGAGGGTTA AAGGAGGCTG AAGGAAGGGG CGTCACCGAC AAGATGCAAA CTGAGGGGAT 960
TGAAGAAATG GGGTTTCAGG TCCCTCTCCT GCTGATGATG GGAGCTTCCT CATAACTGGG 1020
ACCCTGTGAC CCTGTGTCCA TGTCTCTAGG AAGCCAGCAG GGGTTGTGCA GAGGAAGTTT 1080
ACAGTGGTCT AAAACCACAT GACCAGAGCC ATGGTGGCTC CCTCTTTCCA CGTTGCTCAT 1140
CCAAGCCTAT CAGGTCACAG TGCCTGGCTT CTAGAACTTT 1180