EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13470

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:156265400-156266700

Target genes

Number: 21
Name	Ensembl ID

Uqcc	ENSMUSG00000005882
Cpne1	ENSMUSG00000074643
Rbm12	ENSMUSG00000089824
Romo1	ENSMUSG00000067847
Nfs1	ENSMUSG00000027618
Rbm39	ENSMUSG00000027620
Phf20	ENSMUSG00000038116
4921517L17Rik	ENSMUSG00000038085
Scand1	ENSMUSG00000046229
Gm14251	ENSMUSG00000081751
Gm14253	ENSMUSG00000082321
Gm14173	ENSMUSG00000061272
Epb4.1l1	ENSMUSG00000027624
0610011L14Rik	ENSMUSG00000027628
Dlgap4	ENSMUSG00000061689
4930405A21Rik	ENSMUSG00000086638
Myl9	ENSMUSG00000067818
Gm14230	ENSMUSG00000087179
Tgif2	ENSMUSG00000062175
1110008F13Rik	ENSMUSG00000027637
Dsn1	ENSMUSG00000027635

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr2:156265540-156265554	AAGATAAGACAAGA	+	6.59
REST	MA0138.2	chr2:156265865-156265886	GGGGCTGGCCGTGGTGTTGAG	-	6.26

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03163	chr2:156251577-156283927	TACs
mSE_10275	chr2:156265242-156266669	Embryonic_stem_cells

Enhancer Sequence

TTTGGTTTTG GTTTGACACT TTGAAAACCG CTGGCTGAGT TAGGCACAGG GACACATGCC 60
TCTAATCCTA GCACTAAGAA TACCAAGGGG ATATCCCAGG CCAATGTAGG TTACACAACC 120
AGGCCCTGGT TCACAACAGC AAGATAAGAC AAGACAAATA AACAAACAGG AAAGAGAAAA 180
CAAAAAATAC TACTGGTTCA CAGCAGGGTA AGGTTACAGA AAGGGCAAAA GCCAGTGACC 240
AACATTGATT GGGAAATTGC AAAGTCATAG TGGGGTTGTT AGTTAAACAG GCCTGCCAGG 300
GCTGTAACGT TACCCTAGAA TCTTCTGGTT TAGTTTTGGA TAGATGTGGG GTACCTCTGT 360
GTATGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGAGAGA GAGAGAGAGA 420
GAGAGCATGC ACATGTGCAC ATGTGCGGTC AGGGGCTGTG GGGGAGGGGC TGGCCGTGGT 480
GTTGAGCCCG GCTGGCCCAG GTAGAATGAA TGGCTAACAG AGCTGGCGTG TGTTATCCCT 540
GAGTAGTGGG GGCAGGGGTG GCTTTAACTC CATGTAAGAG GAGCGATTTG GCTCCTTCCT 600
GCCAGCACTC GGGCCCCACG GAGATATCTG GGCAGGAAGC ACTGGGAACA AGGAATTCTC 660
TGTCCACAGC CAGCGAGCAG CCAGGACAGG GAGGTGGTTT AGGAGTCCTC CCCGGAGGGG 720
GTCTGCCCAG CAGTTCCCTG ACATTTGGGC AAGCTCCTGT GTGCATGGGG AGGTGGGGGC 780
ACAGTAAGGG GAGGCAGAGA TCTCTGCTCA AGCATTTATT CCTCACGTTC AAGCCTTCCC 840
AGGGGCAGGC TCAGAAGCAA GCAGCTCTGC AGGGCTCAGG GTGGAGAAAG AAGAGACCAT 900
AGGTATCAGT CGCCATTAGT TTACTGAGGG AGCAGGGAAC ATGAGAGGGA TTGTTACAGG 960
TCGCCTGCCT CAGTGGAGGC CACAGGCCCA CAAGAAAGTA TCTTACTCTG AGGCTGTGGC 1020
CCCGTCACTT TCTTCCTCTG GGTCTCTGCT CCACAATGCT TAGAGTGTGG ATAAGCGCAT 1080
CAGACCGCCT GAAGTTGTTC CCAGACGGAC AGGCTGGACC CAGATACACA GGAACGATTT 1140
CCACAATGGA GGTTGCAGGC CTGCTCTTGG TTGACCGGGG ACAGATCATA GGCCAGAAGG 1200
ATGAAGAATC AGGCTAACTC GCCATAAACT CACTGAGGCT GTCCTGTACC TCAGTTTAGT 1260
TGTCCAAACA TAAAGAATGG ACTGTTTTTC TTCTAGGGTC 1300