EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13429

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:154374350-154374630

Target genes

Number: 14
Name	Ensembl ID

Cdk5rap1	ENSMUSG00000027487
Cbfa2t2	ENSMUSG00000038533
1700003F12Rik	ENSMUSG00000038523
1700007I08Rik	ENSMUSG00000078129
Necab3	ENSMUSG00000027489
E2f1	ENSMUSG00000027490
Pxmp4	ENSMUSG00000000876
Zfp341	ENSMUSG00000059842
Chmp4b	ENSMUSG00000038467
Gm14217	ENSMUSG00000082064
Raly	ENSMUSG00000027593
a	ENSMUSG00000027596
Eif2s2	ENSMUSG00000074656
Gm14226	ENSMUSG00000084897

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr2:154374503-154374517	ATTCCCCTGGGAGT	+	6.21
EBF1	MA0154.3	chr2:154374503-154374517	ATTCCCCTGGGAGT	-	6.24
SP1	MA0079.4	chr2:154374581-154374596	GATGGGCGGGGCCAA	-	6.23

Enhancer Sequence

AGTGGCAGGC CAGGATTCAA ATCAAAGCCA TAGAAGTCCC CCTCTACTCA CCCTTAAGCA 60
CCTTATAAGT ATTGCTTTGT TAAAGCACTA GCCCTGTTTT GCAGCTGGGA AGCTAAGACC 120
AGAAGAGGTC ATAGACAGTG GAGCAGTGGC CAGATTCCCC TGGGAGTTAC AGGGGAGGAG 180
CAGAGTTTTG GTGTGGTGAG GTCACTTGTG AGCTCACAAT ACAGTTACCC TGATGGGCGG 240
GGCCAAACTG GGGCCCCTGG TTAGAGGGCA GGGCCGAGGC 280