EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13232

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:130664460-130665130

Target genes

Number: 22
Name	Ensembl ID

Vps16	ENSMUSG00000027411
Fam113a	ENSMUSG00000037773
Ptpra	ENSMUSG00000027303
Mrps26	ENSMUSG00000037740
Fastkd5	ENSMUSG00000079043
Ubox5	ENSMUSG00000027300
Ddrgk1	ENSMUSG00000068290
Itpa	ENSMUSG00000074797
Gm14057	ENSMUSG00000089662
Gm14048	ENSMUSG00000080989
A730017L22Rik	ENSMUSG00000085566
4930402H24Rik	ENSMUSG00000027309
Atrn	ENSMUSG00000027312
Gfra4	ENSMUSG00000027316
Hspa12b	ENSMUSG00000074793
Gm14232	ENSMUSG00000087405
1700037H04Rik	ENSMUSG00000027327
Cenpb	ENSMUSG00000068267
Cdc25b	ENSMUSG00000027330
Spef1	ENSMUSG00000027329
2310035K24Rik	ENSMUSG00000068264
Pank2	ENSMUSG00000037514

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr2:130664688-130664703	GGGTTCAAGGTCAGC	+	7.63
RORA	MA0071.1	chr2:130665011-130665021	ATCAAGGTCA	+	6.02
ZNF263	MA0528.1	chr2:130664562-130664583	AGAGGAGAGAGAGAGAGAGAG	+	6.22

Enhancer Sequence

CACTTGTCCA GCAAAAGCAA TGTATTGGGA TTTGACCCTC AATACTAGAA AGAAACACAC 60
ACACACAGAC AGAGAGAGAG AGAAGAGAGA GACAGACATG AGAGAGGAGA GAGAGAGAGA 120
GAGAGAGAGA GAACACAATA CAACACTCAA TCAAGAACAC AGAAAAAGCC GGCCAGACAC 180
GGTGGCACAG ACTCAGCATT CAGGAGGCAG AGGCAGGTGG ATCTTTTCGG GTTCAAGGTC 240
AGCCTGGTCT ACAGTGAGAC CCGGTCTCAA TTAAAAAAAA AAAAAAAGAC AGAAAATAGG 300
ATAAGCTATT CTAATATTAG TTGACAACCC CCACTCAAGG GAACAATAGC ATATTGCTTT 360
GCCAAATGGC TGCAAGTAAG CAAACAAAAA AGGCCTCTTC TGGTTTAATG ACAGGTTAGC 420
AGTACCCAAA CCCCAATGAC TCCTCCCTTC CCTTTCTTAT AGGCTCCTAC TGCAACACCT 480
CCACCACTCC AACCTCCGCG TTTCTCTGGC AGCCGCATAC TAGCTCCTTC ACAAACAAAG 540
CCCGGACGGC TATCAAGGTC AGCCCCAAAG ACAGAGAGCA GAAATTGGAA ACAGATCTTC 600
TGTATGGAAA AGGGCAGGGC AGCACTCCCT AATATCAACT CCCCTTCCAG TCCACCCGCA 660
CTCCTTATCA 670