EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13104

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:119021360-119023290

Target genes

Number: 24
Name	Ensembl ID

D2Ertd750e	ENSMUSG00000027331
Ivd	ENSMUSG00000027332
Chst14	ENSMUSG00000074916
Ccdc32	ENSMUSG00000039983
Rpusd2	ENSMUSG00000027324
Casc5	ENSMUSG00000027326
Rad51	ENSMUSG00000027323
Fam82a2	ENSMUSG00000070730
Gchfr	ENSMUSG00000046814
Gm14137	ENSMUSG00000055926
Gm14138	ENSMUSG00000081572
Zfyve19	ENSMUSG00000068580
Dnajc17	ENSMUSG00000034278
Ppp1r14d	ENSMUSG00000027317
Spint1	ENSMUSG00000027315
Rhov	ENSMUSG00000034226
Vps18	ENSMUSG00000034216
Dll4	ENSMUSG00000027314
Gm14207	ENSMUSG00000074912
Chac1	ENSMUSG00000027313
Nusap1	ENSMUSG00000027306
Ndufaf1	ENSMUSG00000027305
H3f3c	ENSMUSG00000082029
Rtf1	ENSMUSG00000027304

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:119023098-119023110	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr2:119023268-119023280	AAACAAACAAAC	-	6.32
GFI1	MA0038.2	chr2:119022243-119022255	CAAATCACTGCA	+	7.22
Nr5a2	MA0505.1	chr2:119022846-119022861	GAGTTCAAGGCCAAC	+	7.29
SCRT1	MA0743.1	chr2:119021541-119021556	AAATACCTGTTGCAT	-	6.17

Enhancer Sequence

AACTGGGGCC CCCTTGAAGA GCAGAAAGTG CTCTTAACTG CTGAGCCATC TCTACCACAG 60
GAAGGGACCT GTAGTAAGCT TTTCTTTTGG TAGCGGTAGT AGTTGTTCAA TTTGGATCTT 120
GAGAAAGGAT GTCCTCAGGA CCCACAACAG TGGAACAAAA AGCATCCCGT AGGCATGCAA 180
CAAATACCTG TTGCATGAAA GAAAGGGGCA AACATTCATT TGCTTTCAAT CAAAACAGTT 240
AGAAAGCCTC AACCAAGTCA ACTAGCTGCA GCCCACAGAA GGGTGGAAGG AAGTGTGTGC 300
TCTCCGGGCT CCTCCTCCCC AGCCCTCACC CTTTCCTAAC TGCCCATTCT ACCTATTTAC 360
ACCTTTCCTC ACAAAAACCA GGTCTAAGCC AGGACATGCT TTAATCCCGG CACTCAGGAG 420
GCAGAGACAG GGGCTAGCAA GATGGCTCAG TGGGTAAGAA CACTGACTGC TCTTCCTAAA 480
GGTCTTGAGT TCAAATCCCA GCAATCACAT GGCTCACAAC CACCTGTAAT GAGATCTGAT 540
GCCCTCTTCT GGTGCGTCTG AAGACAGCTA CAGTGTACTT ATGTATAATA AAAAACAAAT 600
CTTTAAAAAA AAAAAAAAGA GGCAGAGATG GTGGATCTCT GGGAGTGTGA GGCTAGCCTG 660
GTCTAGCTAG CCTGGAGTTC CAGGATAGCC AGGGATACAC AGTGAGACTC TATTTCAAAA 720
ACAAAAGTCT AGAAGACAAC TTACTGAGAC AGACTACCAG GACAAGCTCA GTGGGAACCA 780
GATGTTATCT CCCCACAGCC CACAGCACAG GGGTGGGGGT GGGGTAGAAG GAATAAGGCA 840
GCAACTGCAC TCAGCCCCTC CAGGAGCTCC TTAACTGGTT CCACAAATCA CTGCAGCCCA 900
GCCCAGTGGA GGTGGCCACA GTCTGAGCTC CTGCTACTCA GGGGATTTGC CCCAGGCACC 960
CCACAGGGCC TCTGACAACC TTTCCGTCTC CAGTTTCACC TCTTGAGGTT AAGGATCTCC 1020
TGACTCACCC AGAAAAGCAA GGGCCGAGGG ATCCAATAAA TAGAAACAGC CATCATTAAC 1080
TTAAAAGAAA GCTGCCCTGC AAAGAACAGA TCATTATTTT TTTAAAGGCG GCTGTTCTTT 1140
CTTGCAGTAA GACTTGGAGC CAGGTAAGTA AGAGGTACAA ATAATTAGAC CCAGTTCTCA 1200
AGAGCCAGGC CAGTTGGTAG CACTCAGACA AGGACACCCA GGGAGGCAGT GGCTACAGGG 1260
ACAGAATGAA CAAACCATCT AGGTGAATCA GCTCAAACGC CATTAGCAGC CCCAGTTCTG 1320
AACAGTGTGA CCACAGCCTG GACACTCATC TCTCCCCAAA CTTAGAGGTA GACATCTTAT 1380
TCCCTTGCTA GCAGGAACAC TAGGAGTTAT GTGACTGTCT GATGTCAGGC AGAAAGAAAG 1440
GCAACACAGG ACTCTGGGCA CACAGATCCA AGAATCCCCT CTGTAAGAGT TCAAGGCCAA 1500
CCTGAGCAAT ATGAGACTCT GTCTCAAAAA ATAAAACGAG CAAGGAGAGA TGGTTCAGCA 1560
GTTAAAAGCA CTAACTGATC TTCCGAGGAC CCGGGTTCGA ATACTAGCAC CCACATGTCA 1620
GCCTAAAAGT CTCTAACTCC AGTTCCAGGG GAAATGACTG CTATTCTGGT CTCTGTGGAC 1680
ATCAGGCATG CACATGGTAC ACAGAAAAAC ATGCAAGCAT GTTTGGTTTC GTTCATTCGT 1740
TTGTTTGTTT GAGACGGGGT CTCACTCTGT GGTCTAGCTG GCTTGGAACT CATGGTGTAG 1800
ACAGGCTGTC CTCAAATGCA CAGAGCTCCA CTTGCCTCTG CCTCTGGAGT GCTAGGATTA 1860
AAGGTATGTG CCACCATACT TGGCAAATAA AATAAATATA TAAAAATAAA ACAAACAAAC 1920
TGGGCATACT 1930