EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-13015

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:106676280-106678600

Target genes

Number: 5
Name	Ensembl ID

Gm14014	ENSMUSG00000087225
BB218582	ENSMUSG00000085218
Mpped2	ENSMUSG00000016386
SCARNA4	ENSMUSG00000088078
Gm13902	ENSMUSG00000084164

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXB1	MA0845.1	chr2:106677547-106677558	TATGTAAACAT	+	6.14
FOXC1	MA0032.2	chr2:106677547-106677558	TATGTAAACAT	+	6.32
MEF2C	MA0497.1	chr2:106677784-106677799	AAGCCCAAAATAGAA	+	6.13
NR2C2	MA0504.1	chr2:106678570-106678585	TGACCCCTGACCTCC	-	7.05
RXRG	MA0856.1	chr2:106678570-106678584	TGACCCCTGACCTC	-	6

Enhancer Sequence

ATGCAAGAAG TAGTGCCATT CCAATGAATG CCTACTTTGG GCAACATGGT AGTGAGATGT 60
TGTTGTTGTT GTTGTTGTTC TTGTTGTTCT TGTTGTTGTT CTTGTTGTTG AGACAGGTTT 120
TTACGCCATA GCCCATGATG ACCTGGAAGC CACTATGCAT CCCATGCTGA TCTCAAGCTT 180
GAGGTAGTCC TTCTGCCTCA GCCTCCTGAG TGCTGGGACC ATGTGCTGGT ACATGCATCA 240
CTGGTGACTC TGAGCTGAAA GGTCTACAGA CTAGTACACC TCACTCAGAG GACAAGGAAG 300
CCAGAGCTCG GTCAGTGCTG GCAGGCAGTC CCTACTCTGC AGACTCATTG AGTTAAATCA 360
CTGACAAGCA GACCCAGGGA TAGTATCGTT TAGCTATAGT CTAGTAGACC CAGCGACACT 420
GGGTTTGCAG TCAGAGGGTC AGGACTTATT TTGAGTTGAC TCCATCAGCC TTGTCACCTT 480
GAATAAGGGG TCAATTCTAA TGCAGCTCTT ACATCTGAAA AGCGGTGAGT GCAGTGCCTG 540
TCTTAGAACG GCCCCAGAAA CAATCAGTCG TGCAGTGCAT ACAGTCTAGG AGCCTGTCTC 600
TGTTAGGTAT CACGTCCATC AACCCCCCAC CCCACCCTAC TCGCTGCCCC AGCAGAAAGC 660
CAGGCCATTC ATAGCTTTGT CTTTGAAGAC TTTGTGGGCT CTGCTGTCTA TGTCCCCCTC 720
TGCTACTGTG TAGCATGCAA CTGTGGTTAC TGAAGCAGCA ACAGTTCTGT GGTAGCCCAG 780
TAAAGCTTTG CGTACAAAAA CACGCACCAA AGCAGGTCTA GCCAGCGGGC CCCACAGTGT 840
GCTGAACTGC TGCTGTAGGT ATGTCTAGCT CTACGGGACG AATACAATAC ATAATTCCAT 900
TGGTACTCAA GGAAACCAAG GCACAGAGCT GTTAAGTCAC CTGGTTAAGG TAGGATCAGT 960
AAAGGGCAGG AGTAAGAACT ATGTGCTTTT TACCTACTGA TCCGAGCTCC CTGCTCCTGT 1020
GACAGCAGAA GGCACTATTG TGTGAAGAAG GACCCTCCCT GGCTCCCAGA CGCAAGTGAA 1080
GAAGCGTGGA TCACAGAAGT TGAGCGTCTG TCCCCTCGCT GTCACCACCC CCACCTCTGC 1140
CCTGCTTTAC TGTCTCTATA GTAACTGAGA TTTCTGGTGC ATTATAATGC AAAGGAGTCA 1200
TCCTTATTTT TCTGGGAATC ACCAAAATAT ACCCCTACTC TATAAAACAC TATAGCGACA 1260
CTGCAAATAT GTAAACATTA AGCTTCAAGC AACAAAGCGC AGAGTTGGCT ACAGATGGAC 1320
TTAATCAGAA ACATGTCTGC CTAGTTCTAA CACATGCAGC CTATTTCTTA ATAAAAAATA 1380
ACCCCGTGCA CACTTACCTA TGCCTTTTTT CTTCCTAAGT GGAGTAAAAG TAGCCCTGGA 1440
GTCAAGTTTG AAATTATTTT CATAATTTTG GGTAATTAAG ACACTTCCCA GATCTCATTA 1500
GCGAAAGCCC AAAATAGAAT AATTGCCATA TAATTAGTGA TTGGCAAACC TTTAGAGGTT 1560
TAAAGGGCTG TTCTTTCCAG AGTGGAAGTT CAGGGGCCTT ATCCAGGTTT AACTGAACCC 1620
AGGACCTTTC TGGTCCAGAT ACTAGCTCCT TCCCACTCCG TGTGCCTTGG CTCTGCTTGT 1680
CTTGGGCCCC CATGGTCATG GTTTTGTACT TTCTCACCCC TGTACTCACC CCTGGTGGGA 1740
ATCTTGTTCC CGGACAATGT TTATGCTTGT ACTTGGCGTC TCCAGTCTGG TACAGGAATA 1800
CACAACAGGG AGAAGGCGCC TCTGTGCCCT CTAAGTATGT CCAGTCTATG TAGGGAGTCA 1860
GGGCTGCAGC GAAGCACCTC CCGGGAGAGG GAAGACAGAT CGCTCTGTCA GTGCTAGGAC 1920
ATCCTGCTTT CGGGGGATTT GAAATGCTTT GGGAGGAGGA GAAGCTTTCT ATGCTGTTCT 1980
CAAAATAATT CTAAACCACC ATATAAGGAG CATAGCAATG GGTACTGTCT GTCAGCTAAA 2040
GTAACTGTAG GGAACTGGGA GTGGAGAAGT CCAGTAAACT GCTACAAGTG CTGCATCCCT 2100
AGCCGATGCA GAAAGCTAGG CGTGGTGGCC CATGCTTGTA ATCCGGTGCT GGGGGTTGGG 2160
GTGGTGAAAA TAATCAATTC CTGCACTTGC TGACCAGCCA GTCTGCCAAA CTAATGAGCC 2220
TCAGGTCCCA TTCAGGGAGA GAACCTAGCT CCAAAAACAA AGTAGAGGGC TCCTGAGGAA 2280
GAACACCTTC TGACCCCTGA CCTCCGCACA CATGCACATA 2320