EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12831

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:90745060-90745270

Target genes

Number: 23
Name	Ensembl ID

Ptprj	ENSMUSG00000025314
Nup160	ENSMUSG00000051329
Fnbp4	ENSMUSG00000008200
Rpl30	ENSMUSG00000080873
Agbl2	ENSMUSG00000040812
Mtch2	ENSMUSG00000027282
C1qtnf4	ENSMUSG00000040794
Kbtbd4	ENSMUSG00000005505
Ndufs3	ENSMUSG00000005510
Ptpmt1	ENSMUSG00000063235
Celf1	ENSMUSG00000005506
Gm13777	ENSMUSG00000082108
Rapsn	ENSMUSG00000002104
Gm13778	ENSMUSG00000086495
Psmc3	ENSMUSG00000002102
Slc39a13	ENSMUSG00000002105
Sfpi1	ENSMUSG00000002111
Mybpc3	ENSMUSG00000002100
Madd	ENSMUSG00000040687
Nr1h3	ENSMUSG00000002108
Acp2	ENSMUSG00000002103
Pacsin3	ENSMUSG00000027257
Arfgap2	ENSMUSG00000027255

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr2:90745145-90745165	GGGGGCGGGGTGGGGGGGGG	-	6.5
ZNF263	MA0528.1	chr2:90745145-90745166	GGGGGCGGGGTGGGGGGGGGA	+	6.2
ZNF740	MA0753.2	chr2:90745154-90745167	GTGGGGGGGGGAG	-	6.52

Enhancer Sequence

GCACCGGTGA GAGAAAGGGA AAGGGTGGGC GTTCTGGGTT CTAAGTTCTA CACCGCGCCG 60
GCTCTTGAGC TAAGCTTTTT TAATGGGGGG CGGGGTGGGG GGGGGAGACG ATGGACGGTT 120
TCCTTGGAGA CCGTTTCCTA GGCGACTCCA GGTGGCACGG TCAGATTGCA CAGGGTTATG 180
GACTTCCTTG TGCCCCCGGC CGGGGACGGC 210