EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12718

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:74558530-74560030

Target genes

Number: 14
Name	Ensembl ID

Lnp	ENSMUSG00000009207
Mrpl23	ENSMUSG00000075279
Evx2	ENSMUSG00000001815
Hoxd13	ENSMUSG00000001819
Hoxd12	ENSMUSG00000001823
Hoxd11	ENSMUSG00000042499
Hoxd10	ENSMUSG00000050368
Hoxd8	ENSMUSG00000027102
Hoxd3	ENSMUSG00000079277
1700109F18Rik	ENSMUSG00000052371
Gm14426	ENSMUSG00000086559
Hoxd1	ENSMUSG00000042448
Mtx2	ENSMUSG00000027099
Gm13654	ENSMUSG00000081406

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2

MA0465.1

chr2:74559332-74559343

TTTTATTGCTT

6.32

Enhancer Sequence

AACCCACAAA AGTCTTTCTA CATGGCTGAT GGGATTTTTC TTTCTTTTTT TTCTTTTTTT 60
AAAGGGTCAG AGGGAATAAA AGGTTGCCCT AGTGTCTGAA CTAACAACCC CCTGTTTTCT 120
GGCTAATGAG AGTCAAATCA GGAAGTGGGT TTGCAAATGG CTGGAAATTA GCATGCAAAG 180
AGATCTTTAT ACAAAGAATG TTCTGGGCTG TGTGGGGTTT CTGATAGGAA AGGTTGTTAG 240
TGCATTTGAT TTATAAATCA AACGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTT 300
TTACAAATCT GTGCAGCACA TCCATTATTT TATCAGAGTA GCAAAAAAAA AAAAAATCAC 360
ACATTTTCAC AAGGTTTGTG GCACCTCTGT AGGGCCAATG GAGGGTGATG GGGGCCAATT 420
CTCTTCTTTT TTTGTGCCTC TTCTTGGGAG GTGGGGGACT TCCTGCCATT CCCCACTCCC 480
TTCTCTCATG TCTCCCACAA GCAGAGACAG CCACATTCTC TGTGTGGAGT GTCCAGCCCT 540
TTTCCTGGAT TGCTCAGCAG GATAGACAGA GATAGTCCCA CACTTCTTTC TTAGGCTCTC 600
CCTGTGATGG GGGCCAGCAG TAGGGAGGAG TTACAGAAGA GCCCACTCAG ATGTGGGCCT 660
TCAGGGACCC TTGAGCACTG AGCTAAATGA CTTGGGCACA CAGTGGGGTT GTGCACATCT 720
GACTTCCTGG GCTCAGGTTC TTTGAGAGCC TCCTGTGCTT CCTCACACCC CGCACGCACC 780
CGGCCCCTTC ACACCAGGGC TGTTTTATTG CTTTATTGCT TTAAGGCTCT TCAGAGCCTT 840
ACTCGCCAGA GTCCGGTGGG GCCTGTTCTC CACTTTCTCA CTTCACCAAA CCTCAAGTCT 900
TGCTGTTTTA AGCAGTTTGG TCACTTGCAA AGGCTTCTCT TTCAGATCTG AGCAAATTAT 960
AAAAACCCCT AGGCATGTGG CAATCTTCAA CTTTCACCAA GCCCCATCCA CAACAATACA 1020
GAGGACACTA AGTGTTAATC CCAGCTGCCT CCCCACCCCC AAGGCCACCC AGCCTCTCCC 1080
CTGGCCACTC TTCCCTATTG AATCAAGCAA AAAATCTCAA AAATAATTTC CAACTTTTGC 1140
GATAAGCAAG TAAGAAGTAG CCTTTGTCTT TCCTGCTTAC CACATCGAAT GCTAGAAAAT 1200
GATTGAAATA AAGGCGGTGA TGGTACTCAC AGTGGATGCA GCCCAAGAGT CATAGGACAA 1260
GCCTACCAAC CAGCCTTGTC CAAATAGCAC TATCCCCCAA TTTAAACAGC TTTCTCTGAA 1320
AAGATGCAAG TTGAAAAGCC CGGGGTATTG ATATGAATAT GACCTCTCTC GCATTCTGGA 1380
TATTTGGAAC TATTTAAATC CAAGGGAACA GTTGCAGTGA ACCTTTATTT AGTGAATAAA 1440
AGTTTAAAGC CAAAGGTTAT TTATGGTTCT GCAGAGCCGG GACCTGAGTG GCTATTTATA 1500