EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12715

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:74548930-74550040

Target genes

Number: 13
Name	Ensembl ID

Lnp	ENSMUSG00000009207
Mrpl23	ENSMUSG00000075279
Evx2	ENSMUSG00000001815
Hoxd13	ENSMUSG00000001819
Hoxd12	ENSMUSG00000001823
Hoxd11	ENSMUSG00000042499
Hoxd10	ENSMUSG00000050368
Hoxd9	ENSMUSG00000043342
Hoxd8	ENSMUSG00000027102
1700109F18Rik	ENSMUSG00000052371
Hoxd1	ENSMUSG00000042448
Mtx2	ENSMUSG00000027099
Gm14425	ENSMUSG00000081156

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6B	MA0731.1	chr2:74549442-74549459	GTAATTCCTAGAAAAGG	-	6
RARA(var.2)	MA0730.1	chr2:74549877-74549894	AGACCTTTTTATGACCT	-	6.43
RELA	MA0107.1	chr2:74548958-74548968	GGGAATTTCC	+	6.02
Rarb(var.2)	MA0858.1	chr2:74549877-74549894	AGACCTTTTTATGACCT	-	6.5
ZNF263	MA0528.1	chr2:74549585-74549606	AGAGGAGAGAGAGAGAGAGAG	+	6.22
ZNF263	MA0528.1	chr2:74549747-74549768	AGAGGAGAGAGAGGAGAGAGA	+	6.78
ZNF263	MA0528.1	chr2:74548941-74548962	GAGGGATGGGGGGGGGGGGGA	+	7.34
ZNF740	MA0753.2	chr2:74548948-74548961	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr2:74548946-74548959	ATGGGGGGGGGGG	-	6.07
ZNF740	MA0753.2	chr2:74549302-74549315	GGGGGGGGGGCAG	-	6.33

Enhancer Sequence

GGACCTAAAG TGAGGGATGG GGGGGGGGGG GAATTTCCTT TCTGTGGCAA TAGATTAAAA 60
GCCCAATCGT GGGTGCTCAA AATGGTATTT CAGAGAGGTA GACAAGTATC CCAAACCATT 120
CACAGCCTTT GGGATGAGTG GTTGCTCCCC CACCACAGAA ACACGTAGGA GGCGGGAGGG 180
ACCCTAATTT AAGTTGGAGC CAAGTGGCAA ATGAATGTGC TCTCTTGGCC TAAACAGCCC 240
CGTTTTCTGG GTAAAGTATT GGGATGTGGC TTTCCTGAAA TGAGCGGGTA AAAACTGAGA 300
GTGCCTGCTT TCCTTCTGGA CAAGTGTTTT TTTGTGAGGG AGAGGAAGAG AGTAGCCAAG 360
TGACCAACGT TGGGGGGGGG GGCAGACTTG GGACTGGGGG AGGCGCTGTG GGATGACATC 420
CCCGGAGCTT AAGCACTGCC TGGTCTCATT TCCCTCCCAC ATGGCGGCCA ATTGCACAGA 480
CGTTTTGAGC CAAACAAAAC CAAAAATGCC CAGTAATTCC TAGAAAAGGT GTGGTGCGTG 540
CGCGCGTGCG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGAAAGAG 600
GGGGGGGGAG GCACAGAGAC AGACAGAGAC AGAACGAGAG AGAACTGACA CACAGAGAGG 660
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAAGA GAGGAAAGGG 720
ATTCCGAAGA GAAAGGAAAA GAAAAGAAGA TAAAAAGAGG AGAGGTAGTA AGGAGAGAGA 780
GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GGAGAGAGAG GAGAGAGAGA 840
GAGAAAGAGA AGAGGAAAAA CATGGCGCTC GCGAGCTGTA TGTGCAAAAT CCGCAAGGAA 900
TTGCAGTAAA TTCCTTTTTG TTTGAAGAAA ATTTACAACT TGGTAATAGA CCTTTTTATG 960
ACCTATTTGC GGTCGTCATT GGCTGCGGCT GGTCATGTGC AGGCGCCGCT CGCCTTCACG 1020
GCCTTTTTCC TGATTTCCCA GGCGAATTTG CCCCCGCATT CTGCTTTCCC AGAGCCTCAC 1080
CCCCTCTTTT TCTAACCTTT GTCTCTGCAG 1110