EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12507

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:56955790-56956660

Target genes

Number: 4
Name	Ensembl ID

Nr4a2	ENSMUSG00000026826
BB557941	ENSMUSG00000084938
Gpd2	ENSMUSG00000026827
A930012O16Rik	ENSMUSG00000054181

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:56956387-56956399	AAACAAACAAAC	-	6.32
RREB1	MA0073.1	chr2:56956183-56956203	GGGGGGGGGGTGGCGGGGGG	-	7.12
ZNF263	MA0528.1	chr2:56956188-56956209	GGGGGTGGCGGGGGGGGGAGG	+	6.01
ZNF740	MA0753.2	chr2:56956183-56956196	GGGGGGGGGGTGG	-	6.44

Enhancer Sequence

ATTTCCGTGT GTTGCTTTAG TATTAAAGAA TGAATTAATT TTTAAATGAT GACCTATTTG 60
GATCTCTTAT ACTGCCTTAT CAATAAAATC CGCCTATATC GAGTCAGTTC ACCTCTGCGA 120
AACGTAACTG CTCCTGCCGC AATTCTGACA AATAGGCTTT CCCAGTGTCT AGCAGGCATA 180
TGCTCTTATT TGAGACCTAG CTGAGACTTT TGAGAAAAGC AGGGACAGAT CAGTCCCTCC 240
GCTGAAAGTC CCCAACAGAG AAGCTTCCAA GTGGGATTAC AAGTGCGGTC TGCGGGGTGA 300
AGGGGGAGGG GGAAGTTTGG GTTGCTGAGA AACTTCCAGG CCCGCCTAGA AAGCAATAGT 360
TCACATCCTC CCATACCAGA GACAGGTACG AGGGGGGGGG GGGTGGCGGG GGGGGGAGGG 420
CTCGATCCTT GAAGCCCACT TCAGAAGAGA CCATATTAAA AGACACTCTT TCCCAGACCT 480
TTATTCAACC ATAAAAACAA CAGTGGAAGA AAGTTTTGGA TTTCCGGGCT AGATGCCTTC 540
CTGTCCCCTT TTCACCTTAA GGGAATCTGT CCCCTTTCTT GCAGAGGACT CGGAACCAAA 600
CAAACAAACG CCTATCCCAC CCTGGGAGGT GAGGTCAGCC CGAGAGACCC TCACTCCTTT 660
CTCTCCACAG CCACACCGGC GCTGCGGCAT GCACGATGGA TTTAAAAAAA AAAAAAAAAA 720
AGATTCGGGT GCGAGTGCAC AGTTAAGCAA CGCCTGGAGC TGGTGGCTGG AAGACGCGCG 780
ACTTGCTTGC GCCCTTGGGA GTGCTCCGGT ATTATTACGC AGTATTAGAT CTGGGGAGAT 840
GGAAATATAC CCCTTACAGA AAAACTTTTC 870