EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12340

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:34837640-34838850

Target genes

Number: 12
Name	Ensembl ID

Gapvd1	ENSMUSG00000026867
Hspa5	ENSMUSG00000026864
Rabepk	ENSMUSG00000070953
Fbxw2	ENSMUSG00000035949
Psmd5	ENSMUSG00000026869
Phf19	ENSMUSG00000026873
Traf1	ENSMUSG00000026875
Rab14	ENSMUSG00000026878
Gsn	ENSMUSG00000026879
Stom	ENSMUSG00000026880
Gm13443	ENSMUSG00000075391
Dab2ip	ENSMUSG00000026883

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2A	MA0003.3	chr2:34838803-34838814	TGCCTGAGGCT	-	6.32
TFAP2B(var.2)	MA0812.1	chr2:34838803-34838814	TGCCTGAGGCT	-	6.62
TFAP2C(var.2)	MA0814.1	chr2:34838803-34838814	TGCCTGAGGCT	-	6.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01420

chr2:34793067-34838324

Th_Cells

Enhancer Sequence

GAACCAGCAC ACTTGCCCAT GTGGAGCTCA TAATGGATTC AGGCTGCCAC ACGCTACACA 60
ATTCTATAAG ATTAAACGAT GGCAGGTGTG CAAGAGTCTC GGAGGAGGAG TGCAGGCTGA 120
GTCAGGATTT GGCTCAGTCT GGGGTGTCAC AAAACGTGAC TAAAGGAAGC ATGCTCAGAA 180
GGTGTCGGGT AGAGGAGGAG ATGACACACG CTATCAACAG TTCAGCTGCA TTTATGGCTT 240
CATCTGGTGA CTGTGGTCTG GCCTATTTGC CACCACAGTT GGGGACAGAA GCCTAATAGC 300
CTGGAGGCCT GTGCCATGGA AGCAGGGCCC CCGCTACCCT CAGCAAGGAG AGGCAGGGGC 360
CAGGCGCAGG CACAATTAGC TGGAGCCCTT CCACTCTTGC TTGGCATCGT GGTTGCATGC 420
GCACTGTGGG CAGTGACACA GAAGTTCCTG GAAGTAGAAA AGTCTCTGCC AATAATGAGA 480
CACGCTGCCT TGCTAGTCTC GATGTGGTGA AGGGTAGATT CCTTTTGTCC TTGTTGCCTA 540
GTCAGCGACC TATTTACACG TTTCTTATGT TAATTCAGTT AGCCTATGCT TTAAGAAACT 600
CTGGTTACAT TGGCTTTCAT CTGAAAAATC TAGTAGAGGG CTGGGCAGGA GTGTGGACCT 660
GGGATACCCC GGGGGTTTGC TGTATGTTTT GGAGCCTCCA TTTTGGCAAC TCTAAAATGG 720
TGATTATGAG CATCCCTGTA CTTTGGGAGA CTCTGGAGCC ACTGAGTGGG GATCTCTACG 780
TGAACTCCTG AGACCTGAAG TGCGACACAT GATGTCACTT GAAATCTAAC CTCTGTGTAA 840
GTCATTTGTG TACAGCACAG ACTGAGGATC CAAGAGAGAC TAGGTCCGGG CCAGAATGAC 900
AGTCTCCAGA GTCTTGGTTT CCTTTCCCGG GGCTTTTGCA CGGGGCTTTG TCTTCTGGTA 960
GAGCAATTAC TGGCAAGAGT AAGTTCCAGG GGAAATGGAT ACTGAGAGGG AGAGGCAGCT 1020
GGGAGAGCAA AAGGCTTTCC TGTCAGGGGC ACAGAGAAAG CAAGAGTGCA GAGCAACTCC 1080
CCTGCCTGCT CAGGAGGCCA GGCTGGGGGT GGCCTTCCCG GGTCAAGGTC CTCTACTGAC 1140
AGATCTCTCC CATCCCCTGG GTGTGCCTGA GGCTGAGCCA GCATAAAATA ACACCATTTT 1200
CAACACAGTT 1210