EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12253

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:32263900-32265280

Target genes

Number: 31
Name	Ensembl ID

Aif1l	ENSMUSG00000001864
Nup214	ENSMUSG00000001855
Gm16534	ENSMUSG00000090157
Fam78a	ENSMUSG00000050592
Ppapdc3	ENSMUSG00000051373
Prrc2b	ENSMUSG00000039262
Gm13610	ENSMUSG00000086216
Pomt1	ENSMUSG00000039254
Uck1	ENSMUSG00000002550
Gm13611	ENSMUSG00000066068
Golga2	ENSMUSG00000002546
Swi5	ENSMUSG00000044627
Ciz1	ENSMUSG00000039205
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Lcn2	ENSMUSG00000026822
Ptges2	ENSMUSG00000026820
Gm13413	ENSMUSG00000083004
Naif1	ENSMUSG00000039164
Slc25a25	ENSMUSG00000026819
Fam102a	ENSMUSG00000039157
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
9430097D07Rik	ENSMUSG00000075405
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Cdk9	ENSMUSG00000009555
Tor2a	ENSMUSG00000009563
Ptrh1	ENSMUSG00000053746

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYB	MA0502.1	chr2:32264761-32264776	GCCTCGGCCAATCAG	+	6.26
Nr2f6	MA0677.1	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.14
RXRB	MA0855.1	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.2
Rxra	MA0512.2	chr2:32265156-32265170	TGTCCTTTGACCTC	-	6.19

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_08242	chr2:32263796-32265293	Kidney
mSE_08445	chr2:32263793-32265478	Liver

Enhancer Sequence

CTCATTTCAC TGGGATGCTC TCCTGTCTGG TCCTGTGCTT GGGGACTCTG TCCAGCAGGC 60
CCAGGCTGAT GGCCCCCACA GAAGGACCGA GGAGGCCAGC AGCGCAGCCT CAGGTTTACT 120
TCTGCACTGC CATCAGCAGC TCTCATCCAG CCCAGACCAA CTGTGGCCAC GCTGGGCTGG 180
CTGGCCCTTG GGTGCAAGGA CCAAGGTCCA CCTGGGCAGT TAGGTCCACC AAGAAGGTCC 240
CTCCCCTTCT ACCTTTTCCC TACATTCCAA TCCACTCGGA CCAGTGCGAT CTGGATCGGG 300
GACAGCAGGG CACAGGCCAC CACTCTCCCC TCTGTGTGAA CTGAGACATG GCCTTCCCTT 360
TCCGGACTGT AAGAAAGGTT CCCATGGGGA AACTGAGGTT GGGCAATGCA GAAGCCTTGC 420
CCGAGATCAT ACCATGATGC CCTAAAATAC CTTGTAACCC GATCCAAAGG CTACGCAGGG 480
CTAATATAAT CCAAACCACA TGTGCATGTT AACAGTTCTG GGCTCCAGGC ATGTGCAGCG 540
ACAGGGAACA AAGCCCTCGG CGCCGAATGG ATGGATAAGA AAGAGCCCGA GGAATGAGAA 600
CAGTTAGCTG ACACCAGGCA GCAGGGCGGG GAGAAGAGGC CAGCTTAGGT GGGGAACAGC 660
CTAGTTCTGA GTAAGGCCGG CAGTGGAGGT CTCACGACCC TAAAACACAG GGCCCGGGGA 720
CAGAGACTGC CGATATCCCT GGCCGGTGAA CCTTGTACTG TACCCACCTG ACAGTGCCCG 780
ACAAGCCAGT TCAATTGCTG GTAAGGCCTC TCCTTCCAGC CGACATGGAG GACTTGAATG 840
AGTGGCAGAG CAGGCTTGAG GGCCTCGGCC AATCAGTCAG GACCCAAAGG TAAGGAAAGT 900
CGTCATGTGT TGCCTTGGTG ACAAATTCCT GAAGTAAATG CTATATTTGA TGTCCTAGCT 960
AGTTCCCAGA ACCTTGCTTG GCAAACATCA CAGACATTAA TTCTCACACA GCTGTAGGTG 1020
TGGGTAGGGC CAGCTCCCTG TCTCCAGTGG TGGCTGCTAG CAGGACCCAG TTTCTTAGCT 1080
TTCAGACACA GCCCCCTAAT CTCTGCCTCT TCACGTTGGA TCCCCATTCC TCCCACTTGT 1140
TAGAGTGTTG GGACCACTGA GATGACTTAG CAGGTAAAGG TGGTTGCCGT TAATCCTGAA 1200
GACCTAAGTT TAATCCCCAG GACACTCATA AAAGGACAGA ACAGGCTTCC ACAAGTTGTC 1260
CTTTGACCTC CACACATGCA CCTAAATACA CACACACACA CACACACACA CACACACACA 1320
CACACACACA CATCCACACA CATATGCACA TGCACATACA CACACACAAA TAAATAAAAA 1380