EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12076

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:26402800-26403760

Target genes

Number: 24
Name	Ensembl ID

Camsap1	ENSMUSG00000026933
Gpsm1	ENSMUSG00000026930
Dnlz	ENSMUSG00000075467
Gm13562	ENSMUSG00000086779
Snapc4	ENSMUSG00000036281
Gm13563	ENSMUSG00000085767
Sdccag3	ENSMUSG00000026927
Pmpca	ENSMUSG00000026926
Inpp5e	ENSMUSG00000026925
Sec16a	ENSMUSG00000026924
0610009E02Rik	ENSMUSG00000086714
Gm13568	ENSMUSG00000085543
Notch1	ENSMUSG00000026923
Egfl7	ENSMUSG00000026921
Gm20532	ENSMUSG00000092356
Agpat2	ENSMUSG00000026922
Fam69b	ENSMUSG00000036186
Snora43	ENSMUSG00000064858
Snora17	ENSMUSG00000077192
Med22	ENSMUSG00000015776
Rpl7a	ENSMUSG00000062647
Surf2	ENSMUSG00000014873
Surf1	ENSMUSG00000015790
Rexo4	ENSMUSG00000052406

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr2:26403208-26403226	CCTTCCAACCTGCCTTCC	-	6.53
MNT	MA0825.1	chr2:26403389-26403399	ACCACGTGCC	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_02936

chr2:26327248-26413177

TACs

Enhancer Sequence

GGGATGTACT TTGAGCTATG CCCTAATCAC CATGGCAGGG CCAGACTGCT GCTGAGGTGC 60
ACAGCCGGCC ACCAGAGGCC TGAGTGAGAG TGCCACCCTT GCCGTCTAGG CGCTACAGTA 120
GCTCTTATTC GCATGCTTCC ATATGCCCCA CCTCTGTGCT CTCAGAAGGG GAACATGGTT 180
TGCGGAATGC AGGGGGGCTT TGCTGCCTCT GTCCATAGGA AAACCTTTCT CACATCTTTC 240
TGAAGCCTCT GGGAGCCACA CATTCCAGAG CCATCTCCCA GAGCTTCCTC CCCCATCCTC 300
TCAGCATCAC TGTGAGGCAC TTCCCTCCCT CTAAAGGCTT CCCACAGTGC CGTGCAGCTG 360
TCCACACAGC CTGCAGAGCC ACCTGGAGGC ACTTTCTACT GATCTCACCC TTCCAACCTG 420
CCTTCCCAGG CCCTGGGCTG TGGGATCTGG CTAGGGGCTG GACAGGACTT CCTGCATGGC 480
CAGAATGCTG TCTTGTCTGG AGAACCCATC AACTCCCTGT GTCTGGGTTT TAAGAGGGGG 540
GCAGAGAGGG TAACTGAGAG CCCCTCAGGA CTACAAAGGA CATAGGGGAA CCACGTGCCA 600
GTGGGTTTGT GAGGAAGGAC CAGGGGTTTG GGCTTCCTTA GGTTCTAGTG TGAGGAACCC 660
AGCCAGGTGT GGAGCCGGTG CCCGCCCAGG CTGTACTTGA GACACACATT AGTGGATGGG 720
GTGGCAACAG CCCAGCATTT TGGGAGATCC TGCCGTAGGC CTGCTGCATG GATGTTCTGT 780
GTCTTTGTTG CGAGGCCCAT GTAGGGTCAG CTCAGGCCTG GTGTGCTGTA GGTTATGGGG 840
CAGACTATGA CAGAAGGCCT GGTGAAGGCA GCTATGTCTC AGTGTTCAGG GGGGATGAGC 900
AAGAAGGGAG TACTAGAGGA GGCTCAGACC ACCCTGAGGG AACTTCTTAC TCTCTGGGCT 960