EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12065

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:26053210-26054730

Target genes

Number: 22
Name	Ensembl ID

Camsap1	ENSMUSG00000026933
Ubac1	ENSMUSG00000036352
Gm13554	ENSMUSG00000087515
Nacc2	ENSMUSG00000026932
1810012K08Rik	ENSMUSG00000087595
C330006A16Rik	ENSMUSG00000087679
Lhx3	ENSMUSG00000026934
Qsox2	ENSMUSG00000036327
Gpsm1	ENSMUSG00000026930
Dnlz	ENSMUSG00000075467
Gm13562	ENSMUSG00000086779
Card9	ENSMUSG00000026928
Snapc4	ENSMUSG00000036281
Gm13563	ENSMUSG00000085767
Sdccag3	ENSMUSG00000026927
Pmpca	ENSMUSG00000026926
Inpp5e	ENSMUSG00000026925
Sec16a	ENSMUSG00000026924
0610009E02Rik	ENSMUSG00000086714
Gm13568	ENSMUSG00000085543
Egfl7	ENSMUSG00000026921
Fam69b	ENSMUSG00000036186

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr2:26054300-26054315	GGTGGGCGGGGCTTG	-	6.87
SP2	MA0516.2	chr2:26054299-26054316	TGGTGGGCGGGGCTTGA	-	7.06
SP4	MA0685.1	chr2:26054298-26054315	CTGGTGGGCGGGGCTTG	-	6.28

Enhancer Sequence

GAGCTGGGTT TGAACTCCTG ATTGATCTTT ATGTCTAAGC CTCCCAAGTG CTAGGATTAC 60
AAGCAGTGCC ACCAAACCTG CAGGTAAAAT TGCTCCCCAT TTAAAAAGTC ACTGGGATTC 120
TTCCCTTTAG AGATACAATA CAGTTGCTAA ACTCAAAAGT TAACAAAGCC CAAGTGGGTG 180
ATCCCAGCCT TCCCAGCCCC CACCTGATTC CTCTGCGCTT CCCATCCAAA GCCCATGGGA 240
CTCTCCTGCT GGCTGGCTGA TGAGCAGATG GGCACACGGC TGACCCACGC TATCCTTGGG 300
CAGGGGCGTC TCTGCGATCA ATCAAGAGAT ATGTTCAAAA CACACAGGCG GGGATTCAGA 360
ACCCTCACAC TCTTCTCTTG GTTACCTAAG GCTAGTCCCC GGCTGTAGCA CCCCGTCCCC 420
ACCCTCAGGG TACTTTAAAC CCTTTGGAGT CTGAGGCTTC TGGAGGGCAG GCCCTGGGGA 480
GCCGCGGCAC AGATCCTGAA TTTCAGATGC ATACCTCACT CATGCACCAC CCACAGGAAA 540
TCCCTGCAGA TCTATGCCAC CTGCAATCCT CTCTCCACCA GGGTCTGAAG ACTGCTGGTA 600
GCCTAGGTCC TCTCTATACC TCTGGAACAT CCACGGACAC CAGCCCGTGA GCAGGGGCTT 660
AGTTGGGAGG CCCCGCGTTT GCTTTCTGAT TCCTGCAGCT TGCTTGAGTT TGAGCAGACT 720
GGGGAGGGGA CGGGCGTTTC AGATCCGCGC CCGCCTCTAT GCAATCACTA GCCTCCAGGC 780
CTTTGAGGGC TCTGGAGGGT AATTAGATAG CAGTCCTATT AGGGTTGTTC AGATAGGGAA 840
ACTGAGGCAA GCGAGATCAC TCAAATGAGC ACACTCTGGA TCTGTATGTG GGAGGTACCT 900
CAGTCGTTCG TCCTCAGCGC CACCCCATTT CCTGCTACTT CAGCGCTAAA GTTATCCACA 960
AGGCCAGCTG GAGGGAGCCA GAGGGGCTCA GCAGACCGGA GGAGGGCCGG AGGAGGGCTT 1020
AGCACTTCAT TAACCTGTCA ACGCCTAAAA GGTCCCAAGT GGCCTGGGGT GAGGGGCTGT 1080
AGGCTGGCCT GGTGGGCGGG GCTTGAGCTG CTGTCTCTTC AGTGCCTGTC TTCCTAAAAG 1140
AAAATTCAAA TTCATCTCTC CCACCTCAGT TCTCGGCCCC TTGTACAGGA CCATCCCTCT 1200
GCCGTGCCTA GTATATCCTA AAAGTGTGTG CACCCCCTTA CTCCGTACTA GTACACCTAC 1260
AGGGCCTTAA AAGCCCTCAA GTCAGTCGGT GGTGCTCACC TTTAATCCCA GAACTCCAGG 1320
GGATGAGGGG GGCTCTTTCT CACCTGTTGT ACTGGGCGGT ATGGTGACCC GTTCTCCCAA 1380
GTCCCAGGAA GTTCATGGTA GAACTGTAGG TCTGGGGAGT GGAGCTGGGC AAGGAAGGGC 1440
TCTCTTCTTG TACCATAGCA CACAGCAGGT GTCCCACCGG GATAAACCCT TTTTACTCTG 1500
GACCTCAGCT CTCTGTGGGC 1520