EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12061

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:25946120-25947270

Target genes

Number: 15
Name	Ensembl ID

Mamdc4	ENSMUSG00000026941
Camsap1	ENSMUSG00000026933
Ubac1	ENSMUSG00000036352
Gm13554	ENSMUSG00000087515
Nacc2	ENSMUSG00000026932
C330006A16Rik	ENSMUSG00000087679
Gpsm1	ENSMUSG00000026930
Dnlz	ENSMUSG00000075467
Snapc4	ENSMUSG00000036281
Sdccag3	ENSMUSG00000026927
Pmpca	ENSMUSG00000026926
Inpp5e	ENSMUSG00000026925
Sec16a	ENSMUSG00000026924
Egfl7	ENSMUSG00000026921
Fam69b	ENSMUSG00000036186

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZEB1	MA0103.3	chr2:25947172-25947183	GGGCAGGTGGG	-	6.14
ZNF263	MA0528.1	chr2:25947007-25947028	GGGGGAGTTGGAGGGGGGGGG	+	6.21

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10792

chr2:25945396-25948642

Olfactory_bulb

Enhancer Sequence

CGTTCCTTCC AGAAGGACTT GGGGTGGGGT GGGGAGGTAT CTCAGGATCT GGATCCCGGC 60
TTGGAGGCAG GGCAGTGATC CTGACCCCAC ACAAGCATGA GAACCCCTGT CACCTACTGC 120
GTTCACAGAA GCCATGGACT ACTCTCAGTA ATTCTGAGGG CAGGGCTTTG TTCTCCCCAT 180
CTGCGCAGAG GACACAGGAC AGAGGCTCGA GCCCTCCAGA AAACAAGAGA GGAGTGAACT 240
GGACAGACAA GTCACCCACT GATTGGGGTG GAAGGTAGTA AGGGCCAAGC CCAGAAGCAA 300
TCTCAGGGAC TCCTCATCTA GAGGGAAAAA GTTCCCTGAG CCCAAAGCCC CTCACTGTGC 360
AGCTTTCCCT GAGAAGCCCC AGAGCAGGGA GGGCTTTAGT TTCAGGTCTG TTTTTCCTCT 420
TTGCCCACTG AGCAGCCTGC GGAGGGCACT CTGAGGAACT GCAGAGCAGC GTCCCCTCTC 480
AGAGCCCTTG CTCGGCTTCA AGCTTCCTCT GCCGGATAAG GAGGAACAAG GAAGGTGGAC 540
AAGGGGGAAC TCAGTGGGCT CCTTCCTCCA CTCTTTTCTT GGGGACAGAC CTCTATTTGT 600
CGGGTGGAAG GGCTCCGGGT ACACTCTGTG TTTCCTGGCA GCTCCAGGCG CCCCAAACCC 660
AGACCCTGGT CCTGAGCACC CTCAGGGATG CAAAAGGAGT TGGTGCTTGT CGCAGAGCAG 720
CCTCCCGCCC CGTGCGCCCT CCCTCCGCCC CACTTCCAAA ACCGGCCAAT CCCAGCTGGC 780
TTGGTCCCAG CCCAGGTAAG TAGAAGGGTC TCAGGACTAA GCCCGCCAGG GGGCAGGGGT 840
AGAGGGCAGG TCGCCACTGT TTATCAGCAT AGGACTCTGC TGATGGCGGG GGAGTTGGAG 900
GGGGGGGGCG GTGACCGGAG AAGGCGCAGG CCCTGGCCCA ACTCTGCAGA GCCGCACAAA 960
GGGCCGCTGT GTCCCGCGGG AGGAAAGTGC GGGCGGCCGC AGAGGCGCCG GGTGGCTGTA 1020
GAGGAGGACG GAGCCACCCT GCGCCAGGAG TTGGGCAGGT GGGCGCAGCT CCGGGGCGTC 1080
CCGCAGTGCC CCCGCTACTG AGAAGTTGTT GGGCTGGCCG GCAGACAGGA ACCGGAGAGG 1140
AAAGACCTAC 1150