EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-12045

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:24980780-24982060

Target genes

Number: 26
Name	Ensembl ID

Zmynd19	ENSMUSG00000026974
Wdr85	ENSMUSG00000026975
Mrpl41	ENSMUSG00000036850
Pnpla7	ENSMUSG00000036833
Nelf	ENSMUSG00000006476
Noxa1	ENSMUSG00000036805
Gm13387	ENSMUSG00000087028
Nrarp	ENSMUSG00000078202
A830007P12Rik	ENSMUSG00000059555
Cobra1	ENSMUSG00000013465
Fam166a	ENSMUSG00000026969
Tubb4b	ENSMUSG00000036752
Rnf208	ENSMUSG00000044628
Tmem203	ENSMUSG00000078201
Ndor1	ENSMUSG00000006471
Tprn	ENSMUSG00000048707
Ssna1	ENSMUSG00000026966
Anapc2	ENSMUSG00000026965
Man1b1	ENSMUSG00000036646
Dpp7	ENSMUSG00000026958
2010317E24Rik	ENSMUSG00000026955
Npdc1	ENSMUSG00000015094
Fbxw5	ENSMUSG00000015095
Traf2	ENSMUSG00000026942
Edf1	ENSMUSG00000015092
Phpt1	ENSMUSG00000036504

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr2:24981435-24981446	AGCTGTGATTT	-	6.14
RREB1	MA0073.1	chr2:24981642-24981662	CCCCCCCCCACACCCCCCGC	+	6.49
RREB1	MA0073.1	chr2:24981644-24981664	CCCCCCCACACCCCCCGCCC	+	7.13
STAT3	MA0144.2	chr2:24981848-24981859	CTTCTGGGAAG	+	6.14

Enhancer Sequence

CTGAGATTGC CTCCTAGCCC CTCTCAGCTC TGGCGGGCCA ATCTTGCCGA TGAGCTCCAG 60
CAAGACTGTG TAGCACGTGG CAAACATCCC TAAGCTGGCA GGCCACTCTC CTGCCCTTTG 120
TCCATTTGTC AGTTGATCAA TCTGTCTGTT TGCTGAGTAT GTAGGCAGGC ACCCCAGACA 180
GAAACACTTA AATGGCTGAG ACCGCTCAGC CTGTGCTGCC CGGATACCCT AGGGCAGGAG 240
TCTCCGGAGG AGAACTTGTG TGCTGTTGGC ATTATAGTTT CTGGGTTAAC TTTGCTAGCA 300
CTGACATCTT TGGTGCAGGC CCAGAAGGTT GTAAGAGTCT AGTCCTAAAG TTCTGTATTC 360
AGAGTCCCAG ACCCAGCTAG GAGGCCCAGG CTGTGACCAG ATCTGCATGA GGTGCCTGGA 420
GAAGGAGGGG CTTCCAGTCA CTGCACAACT AGAGTTCTGT CATGCAGCCT AAGAGATACA 480
GACCCCAGCT CATGGCTAGA GGATGCCTCA AGTGGACTCT GGCCCACACA TGCCTGCTGA 540
ACTCAATGAG GCCATCACTC ATTCCAGCAT CATGACTTCC ACCCTGTTGC CATTGAGAGT 600
CAAAGATGAG CACTCGTTAG GGACAGAACA GTGCTCTGGA GGCCTCCACT CCTACAGCTG 660
TGATTTAGGT ATTTGTCACC AGAAGCCAGC CACCTAAGCC CCGTAGACCT TGGTTGGCCC 720
TGGGAGAAGG CCATGTGTCA GCAGTACCAC GACTCACATA GCTTCATTTC CTGTCACACC 780
TGCCTCTCAA AACTATTGAG GGGCACGGAG AAACCAAGAT GGCCACACAG CCAGGAACAA 840
TGTGGGGTTG GGCATTGACA TGCCCCCCCC CACACCCCCC GCCCGTTCTT AAGGCTGAAT 900
GGCGGCTGTG CCTGGAGAGA GTGCTGCGAG GCAGAAGGCA AGCTAGTGTT TCAGCGTCTT 960
CTGTTACACT GAAGCTTTTC AAAGAGTGTC TGGGGCTGCT GAATGTGCCT CTCTTGCTCT 1020
CCAAGGCAGA CATTCTACAC AAAGGGGGCT CTTGTCCTGC ACAGGCCCCT TCTGGGAAGA 1080
AAAGCCATTG TCCAGGACAG GGCCGCCCAG CAGGCGGTGC ATGCTCCACT GCCCACCACC 1140
GCGCCCGTCC AAAGGGGCCT CATTCAAGCT TGTCTGCCTG GATTAGCAAG GACTCACGAC 1200
TCAATGTGCT GCGATATTTC ATGTCGAGGG CAGCGGCTGG CTCTGGGCAG AATCAATGCC 1260
TGCTTTTGTC TGCCGAGTTA 1280