EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-11949

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr2:5996000-5996540

Target genes

Number: 8
Name	Ensembl ID

Nudt5	ENSMUSG00000025817
Cdc123	ENSMUSG00000039128
Gm13199	ENSMUSG00000056718
Sec61a2	ENSMUSG00000025816
5430407P10Rik	ENSMUSG00000045319
Gm13384	ENSMUSG00000082332
Echdc3	ENSMUSG00000039063
Usp6nl	ENSMUSG00000039046

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2B(var.2)	MA0812.1	chr2:5996514-5996525	TGCCTCAGGCT	-	6.14
TFAP2C(var.2)	MA0814.1	chr2:5996514-5996525	TGCCTCAGGCT	-	6.32

Enhancer Sequence

ATGGAGATGA TTCCCTGTAT TTCGGAGATG AAGTGGGAGG GGCTCTAAAT TCACAAGGCA 60
GGCACTAAAC TGCCATTTCT GGCCTGACCT GTAAGTCACG TTGGGTGGGC CAAGGTCACC 120
CTGTCTGAGG GCCTCCTCCA GCGTGTCACC AGGCAGCCCT GAGGGCTGAG ACCTGATGAG 180
GAATGAGAGA TGCCGTGGGT GCAGCAGATG AGAGATGAAA GCCTTCCTGA GGAAGTGGAG 240
GAGGCAGAGG CTGAGGCAGA GGAGACTGAC ATGATAATTG CTGGTTCGAA CTCCTAGCCA 300
AGATCCTGTG GGGTCTCCCT GGGGCTTTAC CCTTGGCCAG AGCATGCACT GGTCCCAGCA 360
AAGGGCCTCG GAATGGAATG TTCTGAGGCT GGCAGGTGTG AAGCAACTGC TACAAATGCT 420
TGCTCAGTGA TGTCAGAGAT CAGTGCTGGC AGAGGGCCAG ACTCCCAGAG TGAAGGTCAC 480
TGCGTTGACC TCGAACTCTT AAATCTCAGG TTCCTGCCTC AGGCTCACCA AGTAGCTAAG 540